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RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3..1526
DNA (1524bp) protein (508aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] id=24519522 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RBG_16_RIF_WS3X_71_46_curated
argininosuccinate lyase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1481..2029
DNA (549bp) protein (183aa)
N-acetyltransferase GCN5; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] id=24519523 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RBG_16_RIF_WS3X_71_46_curated
N-acetyltransferase GCN5
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2026..3036
DNA (1011bp) protein (337aa)
ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=RBG_16_RIF_WS3X_71_46_curated
Ornithine carbamoyltransferase, catabolic n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3ECP0_CHLL2 id=5225764 bin=16ft_combo_ws3_JS1 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ornithine carbamoyltransferase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3510..4229
DNA (720bp) protein (240aa)
hypothetical protein id=24519525 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pseudoalteromonas rubra genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_5
unknown

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4406..4600
DNA (195bp) protein (65aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_6
unknown

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4691..4849
DNA (159bp) protein (53aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_7
unknown

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5258..5428
DNA (171bp) protein (57aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(5571..7052)
DNA (1482bp) protein (494aa)
transketolase; K00615 transketolase [EC:2.2.1.1] id=24519527 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RBG_16_RIF_WS3X_71_46_curated
transketolase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(7007..7453)
DNA (447bp) protein (149aa)
transketolase; K00615 transketolase [EC:2.2.1.1] id=24519528 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RBG_16_RIF_WS3X_71_46_curated
transketolase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7891..9717
DNA (1827bp) protein (609aa)
peptidase M14 carboxypeptidase A id=24519529 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase M14 carboxypeptidase A Tax=RBG_16_RIF_WS3X_71_46_curated
peptidase M14 carboxypeptidase A
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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10139..10711
DNA (573bp) protein (191aa)
alias=16ft_combo_ws3_scaffold_896_12 id=24519530 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
id=5225759 Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_12
unknown

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11205..12053
DNA (849bp) protein (283aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(12114..13430)
DNA (1317bp) protein (439aa)
nagA; amidohydrolase id=24519531 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
nagA; amidohydrolase Tax=RBG_16_RIF_WS3X_71_46_curated
nagA; amidohydrolase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(13427..16441)
DNA (3015bp) protein (1005aa)
amidohydrolase id=24519532 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
amidohydrolase Tax=RBG_16_RIF_WS3X_71_46_curated
amidohydrolase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_15
unknown

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comp(16773..16988)
DNA (216bp) protein (72aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_9315_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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17186..17572
DNA (387bp) protein (129aa)
hypothetical protein id=24519533 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Putative uncharacterized protein Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 16 items

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