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RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1..390)
DNA (390bp) protein (130aa)
Uncharacterized protein id=24531055 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(387..1271)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P1C9_DESSD id=5224172 bin=16ft_combo_ws3_JS1 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1271..2257)
DNA (987bp) protein (329aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RBG_16_RIF_WS3X_71_46_curated
ATPase associated with various cellular activities n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KDT2_ELUMP id=5224173 bin=16ft_combo_ws3_JS1 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ATPase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3116..3562)
DNA (447bp) protein (149aa)
id=5224174 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
id=5224174 Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3759..5012)
DNA (1254bp) protein (418aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RBG_16_RIF_WS3X_71_46_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0L7_DESAC id=5224175 bin=16ft_combo_ws3_JS1 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(5019..5483)
DNA (465bp) protein (155aa)
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=24531060 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Synergistetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RpiB/LacA/LacB family sugar-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RBG_16_RIF_WS3X_71_46_curated
RpiB/LacA/LacB family sugar-phosphate isomerase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(5503..6468)
DNA (966bp) protein (322aa)
branched chain amino acid aminotransferase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] id=24531061 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
branched chain amino acid aminotransferase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RBG_16_RIF_WS3
branched chain amino acid aminotransferase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6503..6928)
DNA (426bp) protein (142aa)
Wzb; protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] id=24531062 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Wzb; protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=RBG_16_RIF_WS3X_71_46_curated
Wzb; protein-tyrosine-phosphatase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7031..7684)
DNA (654bp) protein (218aa)
Translation factor SUA5 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S178_THEPD id=5224179 bin=16ft_combo_ws3_JS1 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Putative translation factor (SUA5) Tax=RBG_16_RIF_WS3X_71_46_curated
Sua5/YciO/YrdC/YwlC family protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7686..8186)
DNA (501bp) protein (167aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13) Tax=RBG_16_RIF_WS3X_71_46_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NJ17_DESSD id=5224180 bin=16ft_combo_ws3_JS1 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(8190..8789)
DNA (600bp) protein (200aa)
phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] id=24531065 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RBG_16_RIF_WS3X_71_46_curated
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_10600_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(8759..9178)
DNA (420bp) protein (140aa)
phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] id=24531066 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RBG_16_RIF_WS3X_71_46_curated
phosphoribosylamine--glycine ligase
Displaying 12 items

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