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RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2..292)
DNA (291bp) protein (97aa)
id=24533225 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
id=24533225 Tax=RBG_16_Gemmatimonadetes_66_8_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_2
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(318..944)
DNA (627bp) protein (209aa)
flavin reductase domain-containing FMN-binding protein id=24533226 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Paenisporosarcina sp. TG20 genus=Paenisporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Uncharacterized protein {ECO:0000313|EMBL:KER11148.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
flavin reductase domain-containing FMN-binding protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_3
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1314..1700
DNA (387bp) protein (129aa)
hypothetical protein id=24533227 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase, C39 family Tax=GWC2_Deltaproteobacteria_65_14_curated
peptidase C39 bacteriocin processing
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_4
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1697..2173
DNA (477bp) protein (159aa)
hypothetical protein id=24533228 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACU88843.1}; Flags: Precursor;; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; D
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2335..3207
DNA (873bp) protein (291aa)
alias=16ft_combo_ws3_scaffold_7774_12 id=24533229 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
alias=16ft_combo_ws3_scaffold_7774_12 Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3231..4127)
DNA (897bp) protein (299aa)
EamA-like transporter family id=24533230 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
EamA-like transporter family Tax=RBG_16_RIF_WS3X_71_46_curated
EamA-like transporter family
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4124..4396)
DNA (273bp) protein (91aa)
pyridoxal-dependent decarboxylase Tax=RBG_16_RIF_WS3X_71_46_curated
pyridoxal-dependent decarboxylase id=24533231 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pyridoxal-dependent decarboxylase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4390..5505)
DNA (1116bp) protein (372aa)
pyridoxal-dependent decarboxylase id=24533232 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pyridoxal-dependent decarboxylase Tax=RBG_16_RIF_WS3X_71_46_curated
pyridoxal-dependent decarboxylase
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(5627..6403)
DNA (777bp) protein (259aa)
peptidyl-prolyl cis-trans isomerase PpiA precursor (EC:5.2.1.8)
cyclophilin type peptidyl-prolyl cis-trans isomerase id=24533233 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cyclophilin type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_10
unknown

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comp(6737..6961)
DNA (225bp) protein (75aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7884..8837
DNA (954bp) protein (318aa)
peptidase T (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4] id=24533235 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase T (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4] Tax=RBG_16_RIF_WS3X_71_46_curated
peptidase T (EC:3.4.11.4)
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_11909_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(8944..9561)
DNA (618bp) protein (206aa)
hypothetical protein id=24533236 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 12 items

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