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RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_1
unknown

Not on your lists

comp(1..126)
DNA (126bp) protein (42aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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687..1094
DNA (408bp) protein (136aa)
alias=16ft_combo_ws3_scaffold_1480_8 id=24542528 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
id=5223934 Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1132..1281)
DNA (150bp) protein (50aa)
hypothetical protein id=24542529 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
CBS domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1310..1549)
DNA (240bp) protein (80aa)
signal transduction protein id=24542530 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
CBS domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1864..2922)
DNA (1059bp) protein (353aa)
peptidase M16-like; K07263 zinc protease [EC:3.4.24.-] id=24542531 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase M16-like; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_16_RIF_WS3X_71_46_curated
peptidase M16-like protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_6
unknown

Not on your lists

3012..3374
DNA (363bp) protein (121aa)
id=24542532 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
id=24542532 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_7
unknown

Not on your lists

3483..3704
DNA (222bp) protein (74aa)
id=24542533 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
id=24542533 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_8
unknown

Not on your lists

3732..3989
DNA (258bp) protein (86aa)
id=24542534 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
id=24542534 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4284..4637
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

5230..5775
DNA (546bp) protein (182aa)
alias=16ft_combo_ws3_scaffold_1480_11 id=24542535 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
alias=16ft_combo_ws3_scaffold_1480_11 Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6614..7459
DNA (846bp) protein (282aa)
alias=16ft_combo_ws3_scaffold_1480_12 id=24542536 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
id=5223938 Tax=RBG_16_RIF_WS3X_71_46_curated
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7542..8393)
DNA (852bp) protein (284aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] id=24542537 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RBG_16_RIF_WS3X_71_46_curated
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(8390..10150)
DNA (1761bp) protein (587aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RBG_16_RIF_WS3X_71_46_curated
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] id=24542538 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(10150..11028)
DNA (879bp) protein (293aa)
RnfABCDGE type electron transport complex subunit B id=24542539 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RnfABCDGE type electron transport complex subunit B Tax=RBG_16_RIF_WS3X_71_46_curated
RnfABCDGE type electron transport complex subunit B
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(11038..11913)
DNA (876bp) protein (292aa)
putative NADH:ubiquinone oxidoreductase, subunit RnfA id=24542540 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative NADH:ubiquinone oxidoreductase, subunit RnfA Tax=RBG_16_RIF_WS3X_71_46_curated
putative NADH:ubiquinone oxidoreductase, subunit RnfA
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_16
unknown

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12010..12294
DNA (285bp) protein (95aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_17
unknown

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12322..12663
DNA (342bp) protein (114aa)

This feature has no annotations

RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(12599..13159)
DNA (561bp) protein (187aa)
NADH:ubiquinone oxidoreductase subunit RnfG id=24542542 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
NADH:ubiquinone oxidoreductase subunit RnfG Tax=RBG_16_RIF_WS3X_71_46_curated
NADH:ubiquinone oxidoreductase subunit RnfG
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(13413..14405)
DNA (993bp) protein (331aa)
RnfABCDGE type electron transport complex subunit D id=24542543 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RnfABCDGE type electron transport complex subunit D Tax=RBG_16_RIF_WS3X_71_46_curated
RnfABCDGE type electron transport complex subunit D
RBG_19FT_COMBO_WS3_70_11_rbg_19ft_combo_scaffold_13237_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14402..15754)
DNA (1353bp) protein (451aa)
RnfABCDGE type electron transport complex subunit C id=24542544 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RnfABCDGE type electron transport complex subunit C Tax=RBG_16_RIF_WS3X_71_46_curated
RnfABCDGE type electron transport complex subunit C
Displaying 20 items

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