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rifcsphigho2_01_scaffold_39725

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_39725_1
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

145..1536
-----------------
DNA (1392bp)
protein (464aa)
hypothetical protein Tax=RBG_16_Elusimicrobia_66_12_curated
coiled-coil 411..432 id=132818 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
rifcsphigho2_01_scaffold_39725_2
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

1575..1919
-----------------
DNA (345bp)
protein (115aa)
Helicase putative RecD/TraA family n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MWS4_9FIRM
yneG; hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsphigho2_01_scaffold_39725_3
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

2008..2124
-----------------
DNA (117bp)
protein (39aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_39725_4
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

2182..3357
-----------------
DNA (1176bp)
protein (392aa)
ychF; translation-associated GTPase; K06942 Tax=CG_Pacearch_05
Translation-associated GTPase id=5800320 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_39725_5
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

3373..3594
-----------------
DNA (222bp)
protein (74aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_39725_6
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

3585..3797
-----------------
DNA (213bp)
protein (71aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_39725_7
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

3824..4042
-----------------
DNA (219bp)
protein (73aa)
UPF0235 protein Npun_R3528 n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=Y3528_NOSP7
hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsphigho2_01_scaffold_39725_8
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

4039..4260
-----------------
DNA (222bp)
protein (74aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_39725_9
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

4262..4684
-----------------
DNA (423bp)
protein (141aa)
metallopeptidase-like protein Tax=CG_Pacearch_05
Metallopeptidase-like protein id=3673925 bin=PER_GWC2_41_7 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
metallopeptidase
rifcsphigho2_01_scaffold_39725_10
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

4647..5006
-----------------
DNA (360bp)
protein (120aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_39725_11
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

5048..5191
-----------------
DNA (144bp)
protein (48aa)
Marine sediment metagenome DNA, contig: S06H3_L05621 Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_39725_12
unknown

Not on your lists

comp(5253..5780)
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

rifcsphigho2_01_scaffold_39725_13
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

5829..6140
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003824DB2
Suspect SCG annotation. See neighboring gene [rifcsphigho2_01_scaffold_39725_14].
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Pacearch_05
putative DNA-binding/iron metalloprotein/AP endonuclease
rifcsphigho2_01_scaffold_39725_14
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


6133..6708
-----------------
DNA (576bp)
protein (192aa)
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Pacearch_05
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protein kinase
rifcsphigho2_01_scaffold_39725_15
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


6745..7044
-----------------
DNA (300bp)
protein (100aa)
50S ribosomal protein L7Ae n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL7A_AERPE
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=CG_Pacearch_05
rpl7ae; 50S ribosomal protein L7
rifcsphigho2_01_scaffold_39725_16
unknown

Not on your lists

7057..7362
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsphigho2_01_scaffold_39725_17
unknown

Not on your lists

7364..7681
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

rifcsphigho2_01_scaffold_39725_18
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


7683..7961
-----------------
DNA (279bp)
protein (93aa)
30S ribosomal protein S28e n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RS28_AERPE id=5103742 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e Tax=CG_Pacearch_05
30S ribosomal protein S28e
rifcsphigho2_01_scaffold_39725_19
unknown

Not on your lists

7963..8292
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

rifcsphigho2_01_scaffold_39725_20
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


8293..8487
-----------------
DNA (195bp)
protein (65aa)
50S ribosomal protein L24e n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5N6_KORCO
50S ribosomal protein L24
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_39725_21
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

8576..8809
-----------------
DNA (234bp)
protein (78aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_39725_22
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

8811..9170
-----------------
DNA (360bp)
protein (120aa)
PIN domain-containing protein Tax=CG_Pacearch_05
Putative PIN domain protein id=4379347 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PIN protein
rifcsphigho2_01_scaffold_39725_23
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

9328..10038
-----------------
DNA (711bp)
protein (237aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003770312
hypothetical protein Tax=CG_Pacearch_05
Displaying 23 items

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