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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_15753_5

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2400..2945)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371A5D4 similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 177.0
  • Bit_score: 214
  • Evalue 1.00e-52
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 181.0
  • Bit_score: 356
  • Evalue 2.30e-95
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 179.0
  • Bit_score: 193
  • Evalue 5.20e-47

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGTCGCGATTAGGAAAAAAACCTATAATTGTTCCAAGCGGTGTTGAGGTAAAGATCCAAGGGCAAAAAGTTTTTGTAAAAGGACCCAAAGGAGAGCTTTCGCGGGAATTTCGGGATGAGATCTCTTTTAATCTTAAAGATAGTCTTATTGAAATTTCTCCACGAACCGACACACGTCTTTCAAAGAAATTATGGGGAACTTATGTTTCTTTGGTTAAAAGCATGATTAAAGGCACAATGGAAGGATTTTCGAAGAAACTTATTTTGGAAGGGATCGGCTTTAAAGCTCAATTGGAAGGAAAAGATTTGACTTTAAGTCTTGGTTTTTCCCACCAGGTTAAATTTCTTTCTCCGGAAGGAATTGGTTTTCAGGTTGAAAAAAATACGATCACAGTTAACGGAATAGATAAAGAAAAAGTAGGCGAAACTGCCGCCAGACTAAGGGCGCTTAAAAAACCAGATCCTTATAAAGGAAAGGGTTTTCGGTATGATGGAGAAATTATCAGGAGAAAGGCCGGCAAAAAAGCAGCAGGAACAACGGCTTAA
PROTEIN sequence
Length: 182
MSRLGKKPIIVPSGVEVKIQGQKVFVKGPKGELSREFRDEISFNLKDSLIEISPRTDTRLSKKLWGTYVSLVKSMIKGTMEGFSKKLILEGIGFKAQLEGKDLTLSLGFSHQVKFLSPEGIGFQVEKNTITVNGIDKEKVGETAARLRALKKPDPYKGKGFRYDGEIIRRKAGKKAAGTTA*