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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_15753_6

Organism: Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_43_100

near complete RP 37 / 55 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2950..3339)

Top 3 Functional Annotations

Value Algorithm Source
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 129.0
  • Bit_score: 252
  • Evalue 4.40e-64
30S ribosomal protein S8 id=2824239 bin=GWC1_OD1_38_17 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 129.0
  • Bit_score: 130
  • Evalue 1.10e-27
rpsH; 30S ribosomal protein S8 similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 128.0
  • Bit_score: 128
  • Evalue 1.50e-27

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGATCCAATTTCAGACATGTTAATAAGGATTAAAAACGCTTCTCTTGTCGCAAAAGAGATTGTTTTGGTTCCGCATTCAAAGATTAAGCAAGAGATTGCTAATTTAATGAAAGAGAAGGGATATCTCTCTTCCGTTGAGGTTCGTGGCAGGAAAAGCCGCAAAGTTTTGGAGTTAGCCCCGGTTTATGGGGCGGACGGCGAAGCAAAACTGCATGATATAAAAAAAATATCAAAACCTTCAAAACGAGTTTACAAAAAATCCGCCGAACTCAGACCTATTAAAAAGGGTTTTGGTTTTTCAATTGTTTCAACGTCAAAAGGTCTGAAAACAGATGAGTCAGCGCGCCGCGAAAAAGTCGGCGGCGAAATCTTGTGCGAAATTTGGTAA
PROTEIN sequence
Length: 130
MDPISDMLIRIKNASLVAKEIVLVPHSKIKQEIANLMKEKGYLSSVEVRGRKSRKVLELAPVYGADGEAKLHDIKKISKPSKRVYKKSAELRPIKKGFGFSIVSTSKGLKTDESARREKVGGEILCEIW*