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rifcsphigho2_02_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_63_1
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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2..7102
-----------------
DNA (7101bp)
protein (2367aa)
PKD domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NHL repeat containing protein id=3866368 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
PKD domain-containing protein
rifcsphigho2_02_scaffold_63_2
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7221..7577
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000375A78D
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
rifcsphigho2_02_scaffold_63_3
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7798..9309)
-----------------
DNA (1512bp)
protein (504aa)
Peptidase C1A papain n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFK4_FLUTR rbh
peptidase C1A papain Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
peptidase C1A papain
rifcsphigho2_02_scaffold_63_4
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9748..10974)
-----------------
DNA (1227bp)
protein (409aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WM06_METH6
Amino acid/polyamine/organocation transporter, APC superfamily Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Amino acid/polyamine/organocation transporter, APC superfamily
rifcsphigho2_02_scaffold_63_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11118..11267)
-----------------
DNA (150bp)
protein (50aa)
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
rifcsphigho2_02_scaffold_63_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11236..12159)
-----------------
DNA (924bp)
protein (308aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Flavobacterium sp. F52 RepID=J1KWK6_9FLAO rbh
oxidoreductase NAD(P)-binding subunit Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
oxidoreductase NAD(P)-binding subunit
rifcsphigho2_02_scaffold_63_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12197..14785)
-----------------
DNA (2589bp)
protein (863aa)
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
ATP dependent DNA ligase n=1 Tax=Flavobacterium sp. F52 RepID=J1ACE2_9FLAO rbh
ATP dependent DNA ligase
rifcsphigho2_02_scaffold_63_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14788..15564)
-----------------
DNA (777bp)
protein (259aa)
DNA repair protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036ECE2F rbh
DNA repair protein; K10979 DNA end-binding protein Ku Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
DNA repair protein
rifcsphigho2_02_scaffold_63_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15561..16457)
-----------------
DNA (897bp)
protein (299aa)
beta-aspartyl-peptidase (EC:3.4.19.5); K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Isoaspartyl peptidase/L-asparaginase (EC:3.4.19.5)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000378FEED
rifcsphigho2_02_scaffold_63_10
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16450..17319)
-----------------
DNA (870bp)
protein (290aa)
cyanophycinase (EC:3.4.15.6); K13282 cyanophycinase [EC:3.4.15.6] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Cyanophycinase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENM7_RUNSL rbh
cyanophycinase
rifcsphigho2_02_scaffold_63_11
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17334..19961)
-----------------
DNA (2628bp)
protein (876aa)
cyanophycin synthetase (EC:6.3.2.29); K03802 cyanophycin synthetase [EC:6.-.-.-] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EIY5_9GAMM rbh
cyanophycin synthetase
rifcsphigho2_02_scaffold_63_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20506..21105
-----------------
DNA (600bp)
protein (200aa)
Outer membrane protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF21_FLUTR
outer membrane protein; K08995 putative membrane protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
rifcsphigho2_02_scaffold_63_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21486..21953
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF20_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
rifcsphigho2_02_scaffold_63_14
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22204..22821)
-----------------
DNA (618bp)
protein (206aa)
Major paralogous domain protein n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EG41_CHLL2
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
rifcsphigho2_02_scaffold_63_15
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23281..23895
-----------------
DNA (615bp)
protein (205aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003829540
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
rifcsphigho2_02_scaffold_63_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24015..24452)
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2JX54_9FLAO
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
rifcsphigho2_02_scaffold_63_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24815..26191)
-----------------
DNA (1377bp)
protein (459aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFT7_FLUTR rbh
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
rifcsphigho2_02_scaffold_63_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26203..27609)
-----------------
DNA (1407bp)
protein (469aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFT6_FLUTR rbh
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
rifcsphigho2_02_scaffold_63_19
unknown

Not on your lists

comp(28138..28248)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

rifcsphigho2_02_scaffold_63_20
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28448..29011
-----------------
DNA (564bp)
protein (188aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EX74_EMTOG
putative transcriptional regulator, Crp/Fnr family Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
putative transcriptional regulator, Crp/Fnr family
rifcsphigho2_02_scaffold_63_21
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29087..30286
-----------------
DNA (1200bp)
protein (400aa)
Major facilitator superfamily MFS_1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFR3_NIAKG rbh
major facilitator superfamily protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
major facilitator superfamily protein
rifcsphigho2_02_scaffold_63_22
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30300..30650
-----------------
DNA (351bp)
protein (117aa)
phage shock protein E Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Major facilitator superfamily MFS_1 id=4527457 bin=GWA2_Flavobacterium_35_26 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
phage shock protein E
rifcsphigho2_02_scaffold_63_trna_1
unknown

Not on your lists

comp(30671..30742)
-----------------
DNA (72bp)
transferRNA
rifcsphigho2_02_scaffold_63_23
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30923..32116
-----------------
DNA (1194bp)
protein (398aa)
aspartate transaminase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
aspartate transaminase (EC:2.6.1.1) rbh
Aspartate transaminase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA2_FLUTR rbh
rifcsphigho2_02_scaffold_63_24
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32117..33124
-----------------
DNA (1008bp)
protein (336aa)
PfkB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA3_FLUTR rbh
PfkB domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
PfkB domain-containing protein
rifcsphigho2_02_scaffold_63_25
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33167..33895
-----------------
DNA (729bp)
protein (243aa)
demethylmenaquinone methyltransferase (EC:2.1.1.-); K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
demethylmenaquinone methyltransferase (EC:2.1.1.-) rbh
Demethylmenaquinone methyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA4_FLUTR rbh
rifcsphigho2_02_scaffold_63_26
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33926..34642
-----------------
DNA (717bp)
protein (239aa)
Probable protein-translocating porin PorT n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA5_FLUTR rbh
protein-translocating porin PorT Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
protein-translocating porin PorT
rifcsphigho2_02_scaffold_63_27
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34744..36312
-----------------
DNA (1569bp)
protein (523aa)
Uncharacterized FAD-dependent dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA6_FLUTR rbh
FAD-dependent dehydrogenase; K07137 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
FAD-dependent dehydrogenase
rifcsphigho2_02_scaffold_63_28
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36316..37056)
-----------------
DNA (741bp)
protein (247aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA8_FLUTR
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
tRNA/rRNA methyltransferase SpoU
rifcsphigho2_02_scaffold_63_29
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37256..38179
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein; K04040 chlorophyll synthase [EC:2.5.1.62] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein; K04040 chlorophyll synthase [EC:2.5.1.62] id=89261 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Displaying items 1-30 of 116 in total

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