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rifcsphigho2_02_scaffold_30276_6

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_39_16

near complete RP 35 / 55 MC: 7 BSCG 14 / 51 ASCG 32 / 38 MC: 1
Location: 3822..4463

Top 3 Functional Annotations

Value Algorithm Source
sigma-54-interacting response regulator Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 216.0
  • Bit_score: 243
  • Evalue 2.60e-61
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 213.0
  • Bit_score: 137
  • Evalue 1.40e-29

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGGCCTCCAAAAAAGATCTTGAAGAGACGATTAAGGAAAAAGTCGCGCCCCTGCTGGAAGAGATCATGGAAAAGAATTTAGGGATGCATATCCCTAAAGTAGAGCAAGATATCACCGACAAATTAGCCAATCCTTTAGCCAACATTTATGTTCCGTTTGAACTGCCATTTCAATTAGCTAAACAGAAATTCAAAAAAGAGTTTCTTAAAAAAGAACTGGTTTTTCATTTTGGAAATATCTCGCATCTGGCCAAAACTCTGGGATTAGACCGGAGAAGCATTCACCGGGCCATAAAAGAATTAGAAATTAATCTTGAGACAGCCAGAGAAAATATTCTCCTGCCCGAACAGTTAGTAGATGAAACGATCAGGGGAACTCTCGCCATGTACCAGGATATTCTGCGGCCGGAAAAGATGGAACAGATTTACCAAGACGTTCCGGCATTGTCTAAAAATATCGCCAGACTGCTGCCTCATCCGGATTTTACTTGGAAGGAGATCGAACGGGAGTTTGAGAAACAATTTCTTAGACAAGTTCTTCGGGAAAACAAGTGGAACATTAATTCTACTGCCAGGAAAATTAAAATCCGAGCAGAAACATTACACCGGAAAATCAGAAAATTGGATCTGCGAAAAGAGTAA
PROTEIN sequence
Length: 214
MASKKDLEETIKEKVAPLLEEIMEKNLGMHIPKVEQDITDKLANPLANIYVPFELPFQLAKQKFKKEFLKKELVFHFGNISHLAKTLGLDRRSIHRAIKELEINLETARENILLPEQLVDETIRGTLAMYQDILRPEKMEQIYQDVPALSKNIARLLPHPDFTWKEIEREFEKQFLRQVLRENKWNINSTARKIKIRAETLHRKIRKLDLRKE*