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rifcsphigho2_02_scaffold_30276

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_30276_1

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comp(127..441)
-----------------
DNA (315bp)
protein (105aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S10
rifcsphigho2_02_scaffold_30276_2
unknown

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comp(567..959)
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

rifcsphigho2_02_scaffold_30276_3

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comp(994..2286)
-----------------
DNA (1293bp)
protein (431aa)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043694 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
Elongation factor 1-alpha
rifcsphigho2_02_scaffold_30276_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2415..3440
-----------------
DNA (1026bp)
protein (342aa)
hypothetical protein
Phosphoesterase, DHHA1 Tax=CG_Woesearch_02
DHH phosphoesterases id=5800602 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_30276_5
unknown

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3440..3844
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

rifcsphigho2_02_scaffold_30276_6
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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3822..4463
-----------------
DNA (642bp)
protein (214aa)
sigma-54-interacting response regulator Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_30276_7
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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4837..6786
-----------------
DNA (1950bp)
protein (650aa)
hppA; pyrophosphate-energized proton pump; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=5091323 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hppA; pyrophosphate-energized proton pump
rifcsphigho2_02_scaffold_30276_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(6850..7569)
-----------------
DNA (720bp)
protein (240aa)
Marine sediment metagenome DNA, contig: S01H1_S42444 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_30276_9
unknown

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comp(7756..8703)
-----------------
DNA (948bp)
protein (316aa)
Uncharacterized protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RQI0_9PLAN
Putative uncharacterized protein n=1 Tax=Frankia sp. EUN1f RepID=D3D7K2_9ACTO Tax=ACD80
Displaying 9 items

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