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RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_45_21

RIFCSPLOWO2_01_FULL_unknown_44_21
In projects: RIFCSPLOWO2_01_FULL  |  archaea-rifleo2  |  rifle_organic_carbon  |  rifle-organic-carbon-non-redundant  |  cpr-dpann-all  |  DPANN

Consensus taxonomy:

Taxonomy override: Woesearchaeota

Metagenomic Context

Parent: RifCSPlowO2_01_full_UNK

Properties

Avg. coverage: 21.24 Longest contig: 37.36 Kbp Bin length: 949.82 Kbp GC content: 44.43 %
Contigs count: 71 Features count: 1175 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 36 / 55 MC: 5 BSCG 6 / 51 ASCG 30 / 38 MC: 2
Displaying items 1-50 of 71 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
rifcsplowo2_01_scaffold_18781 9 10426 bp 45.80 22.52 62.27
rifcsplowo2_01_scaffold_30875 11 7343 bp 44.45 23.44 78.97
rifcsplowo2_01_scaffold_34174 19 12829 bp 44.03 20.20 79.95
rifcsplowo2_01_scaffold_9503 39 26710 bp 44.31 23.27 81.65
rifcsplowo2_01_scaffold_31990 11 10583 bp 44.05 21.39 81.98
rifcsplowo2_01_scaffold_92524 9 7464 bp 46.32 18.85 82.07
rifcsplowo2_01_scaffold_9299 17 14371 bp 44.69 22.67 82.37
rifcsplowo2_01_scaffold_49753
Domain: Archaea (100%)
6 5663 bp 47.17 20.50 83.01
rifcsplowo2_01_scaffold_28540 12 11883 bp 40.12 21.69 83.24
rifcsplowo2_01_scaffold_5985 43 37360 bp 41.94 19.30 83.46
rifcsplowo2_01_scaffold_33964
Species: CG_Woesearch_02 (50%)
6 6559 bp 45.11 21.00 83.61
rifcsplowo2_01_scaffold_11961 27 21150 bp 43.26 23.97 84.17
rifcsplowo2_01_scaffold_19854
Domain: Archaea (60%)
20 13887 bp 45.94 21.28 85.22
rifcsplowo2_01_scaffold_16087 18 12177 bp 42.77 21.44 86.03
rifcsplowo2_01_scaffold_19013 19 12678 bp 43.47 18.04 86.37
rifcsplowo2_01_scaffold_13125 25 17886 bp 43.04 22.42 86.45
rifcsplowo2_01_scaffold_13786 36 30063 bp 44.33 23.13 86.46
rifcsplowo2_01_scaffold_50664 10 6533 bp 43.24 20.76 86.51
rifcsplowo2_01_scaffold_105150 8 5540 bp 42.94 19.90 86.53
rifcsplowo2_01_scaffold_82180
Domain: Archaea (71.43%)
7 6724 bp 41.94 20.97 86.64
rifcsplowo2_01_scaffold_26396 13 9677 bp 47.01 22.83 86.90
rifcsplowo2_01_scaffold_30787 11 7691 bp 45.82 19.63 87.10
rifcsplowo2_01_scaffold_41943
Domain: Archaea (55%)
20 12878 bp 44.28 21.94 87.64
rifcsplowo2_01_scaffold_8396 18 15222 bp 43.46 21.09 87.76
rifcsplowo2_01_scaffold_56929 12 8805 bp 44.37 22.62 87.94
rifcsplowo2_01_scaffold_54364 13 10020 bp 44.25 19.33 88.44
rifcsplowo2_01_scaffold_52293
Domain: Archaea (50%)
8 5434 bp 44.85 21.42 88.44
rifcsplowo2_01_scaffold_20097
Domain: Archaea (54.55%)
11 9201 bp 45.93 21.86 88.56
rifcsplowo2_01_scaffold_2561 42 30415 bp 45.66 21.38 88.62
rifcsplowo2_01_scaffold_24350
Domain: Archaea (64.71%)
17 10204 bp 45.36 19.89 89.02
rifcsplowo2_01_scaffold_9039 22 15708 bp 43.08 21.59 89.23
rifcsplowo2_01_scaffold_22138 32 25717 bp 44.48 23.57 89.65
rifcsplowo2_01_scaffold_76033 9 6667 bp 47.13 21.79 89.77
rifcsplowo2_01_scaffold_13190
Domain: Archaea (55%)
20 16200 bp 44.27 22.55 89.78
rifcsplowo2_01_scaffold_20870 15 16938 bp 43.83 21.80 89.78
rifcsplowo2_01_scaffold_6445
Domain: Archaea (70%)
20 18248 bp 44.50 23.74 90.01
rifcsplowo2_01_scaffold_28385 15 7376 bp 43.70 17.01 90.05
rifcsplowo2_01_scaffold_3704 36 28270 bp 43.37 19.71 90.17
rifcsplowo2_01_scaffold_35653 15 14039 bp 44.26 19.90 90.33
rifcsplowo2_01_scaffold_100744 7 7710 bp 46.51 17.18 90.58
rifcsplowo2_01_scaffold_32685
Domain: Archaea (55.56%)
18 12671 bp 44.18 21.20 90.70
rifcsplowo2_01_scaffold_19375 23 17441 bp 44.65 21.76 90.84
rifcsplowo2_01_scaffold_6558 30 23914 bp 40.18 18.11 91.16
rifcsplowo2_01_scaffold_40090 12 10499 bp 41.40 21.14 91.52
rifcsplowo2_01_scaffold_47322 11 5269 bp 45.80 21.01 91.61
rifcsplowo2_01_scaffold_22237
Domain: Archaea (63.16%)
19 18037 bp 45.84 22.85 91.96
rifcsplowo2_01_scaffold_77386
Domain: Archaea (71.43%)
7 5651 bp 45.27 15.07 92.11
rifcsplowo2_01_scaffold_77397
Domain: Archaea (50%)
12 8239 bp 40.87 18.33 92.16
rifcsplowo2_01_scaffold_2413 37 33688 bp 45.47 20.78 92.86
rifcsplowo2_01_scaffold_23343 13 10625 bp 48.05 16.13 92.89
Displaying items 1-50 of 71 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.