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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..866
DNA (864bp) protein (288aa)
ribosomal large subunit pseudouridine synthase C; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] id=5094379 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
RluA family pseudouridine synthase (EC:3.2.1.17)
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(852..1835)
DNA (984bp) protein (328aa)
NAD-dependent epimerase/dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0BZZ2_ACAM1
NAD-dependent epimerase/dehydratase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1911..4433)
DNA (2523bp) protein (841aa)
putative two-component hybrid sensor and regulator Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
putative two-component hybrid sensor and regulator id=14626495 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4612..5907)
DNA (1296bp) protein (432aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase id=1250195 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5968..7149)
DNA (1182bp) protein (394aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7T0_GEOUR
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
DegT/DnrJ/EryC1/StrS aminotransferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7149..8036)
DNA (888bp) protein (296aa)
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Polysaccharide deacetylase id=4775556 bin=GWC2_Methylomirabilis_70_16 species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
polysaccharide deacetylase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8076..9023)
DNA (948bp) protein (316aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIT8_DESAR
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9023..9961)
DNA (939bp) protein (313aa)
family 2 glycosyl transferase; K10012 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.7.8.30] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Glycosyl transferase family 2 id=2278839 bin=GWA2_Elusimicrobia_69_24 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
family 2 glycosyl transferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9958..10905)
DNA (948bp) protein (316aa)
putative Short-chain dehydrogenase/reductase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
short-chain dehydrogenase/reductase SDR id=14430699 bin=bin3_NC10 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
short-chain dehydrogenase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10911..12203)
DNA (1293bp) protein (431aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=2278837 bin=GWA2_Elusimicrobia_69_24 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
3-oxoacyl-(acyl-carrier-protein) synthase 2
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12319..13062)
DNA (744bp) protein (248aa)
enoyl-(acyl carrier protein) reductase; K10780 enoyl-[acyl carrier protein] reductase III [EC:1.3.1.-] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Enoyl-[acyl-carrier-protein] reductase [NADH] id=1967284 bin=GWD2_Deltaproteobacteria_55_8 species=Bacillus clausii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
enoyl-(acyl carrier protein) reductase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_12
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13148..13624)
DNA (477bp) protein (159aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ id=1967286 bin=GWD2_Deltaproteobacteria_55_8 species=Pyramidobacter piscolens genus=Pyramidobacter taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
(3R)-hydroxymyristoyl-ACP dehydratase Tax=GWD2_Deltaproteobacteria_55_8_curated
3-hydroxyacyl-ACP dehydratase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13636..14238)
DNA (603bp) protein (201aa)
Acyl carrier protein id=1967288 bin=GWD2_Deltaproteobacteria_55_8 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphopantetheine-binding protein Tax=GWD2_Deltaproteobacteria_55_8_curated
phosphopantetheine-binding protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14262..15008)
DNA (747bp) protein (249aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase id=1967290 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14998..16305)
DNA (1308bp) protein (436aa)
Beta-ketoacyl synthase id=1967292 bin=GWD2_Deltaproteobacteria_55_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
3-oxoacyl-ACP synthase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
3-oxoacyl-ACP synthase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16372..16758)
DNA (387bp) protein (129aa)
id=1967294 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
id=1967294 Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16792..17265)
DNA (474bp) protein (158aa)
acpS; 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=GWD2_Deltaproteobacteria_55_8_curated
Holo-[acyl-carrier-protein] synthase id=1967295 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
acpS; 4'-phosphopantetheinyl transferase
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_18
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17255..18031)
DNA (777bp) protein (259aa)
Outer membrane lipoprotein-sorting protein id=1967297 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Outer membrane lipoprotein-sorting protein Tax=GWD2_Deltaproteobacteria_55_8_curated
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18056..19390)
DNA (1335bp) protein (445aa)
Coenzyme F390 synthetase-like protein; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Phenylacetate--CoA ligase id=2278795 bin=GWA2_Elusimicrobia_69_24 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Coenzyme F390 synthetase-like protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_20
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19380..21152)
DNA (1773bp) protein (591aa)
Glycosyl transferase, family 39 id=2278599 bin=GWA2_Elusimicrobia_69_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glycosyl transferase family protein Tax=GWA2_Elusimicrobia_69_24_curated
glycosyl transferase family protein
RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_610_21
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21156..22592)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQS3_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB64068.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
Displaying 21 items

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