ggKbase home page

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_108_20

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(18587..19885)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho id=1960445 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 433.0
  • Bit_score: 843
  • Evalue 8.10e-242
transcription termination factor Rho; K03628 transcription termination factor Rho Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 432.0
  • Bit_score: 843
  • Evalue 1.10e-241
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 420.0
  • Bit_score: 680
  • Evalue 3.40e-193

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGGTACGTGGTCAGACCCGCGCCGAGTCGGAGGCCGTGGAAGAAAATGGATTGAACCTTAAGTCTCTTAAGGAGAAGAAGATCAGCGAGTTGGCATTGATCGGTAAAAACTTCAATATCGAAGGCGCAGCCAATATGCGCAAGCAGGAGTTGATCTTCGCCATATTACAGGCCCAAACCGAGCAGAACGGTTTTATCTACGGGGAAGGGGTGCTGGAGACCCTTCCTGACGGCTTTGGTTTTCTCAGAGCCCCGGACTATAACTACCTCCCTGGCCCGGACGATATCTATGTCTCTCCGAGCCAAATTCGCCGCTTCAATCTTCGCACCGGAGATATCATTTCGGGGCATATTCGCCCCCCCAAGGAAGGGGAACGTTACTTTGCCCTGCTCAAGGTGGAAGCCATCAACTACGAAGACCCGGAGAAGGCAAGGGATAAGATCCTCTTTGACAACCTTACCCCCCTCTATCCGAATGAACGCTTTAAGCTGGAATACCAGCCGGACGAATATACCACGCGGGTTGTTGATCTCTTAACCCCGATCGGCAAAGGGCAGAGAGGACTGATCGTGGCTGCCCCTCGAACCGGCAAAACCATGATGCTGCAGAACATTGCCAAGGCCATTGCCCATAACCACAACGAGGCGATCCTGATTGTTCTCCTGATTGACGAGCGACCTGAAGAAGTGACCGATATGCAGCGCTCGGTGGATGGAGAAGTGGTCAGTTCTACCTTTGACGAGCCCGCGACGCGCCATGTCCAGGTTGCCGAGATGGTGATCGAAAAGGCCAAACGGTTGGTGGAACACGGCACGGACGTGGTGATCCTGCTCGACAGCATTACCCGTTTGGCTCGCGCCTACAATACGGTTGTTCCCCCCAGCGGCAAAATTCTCTCCGGCGGGGTGGACTCCAATGCGCTGCACAAACCGAAAAAGTTTTTTGGCGCGGCGCGCAACATCGAAGATGGCGGGAGTCTCACCATCATTGCGACCGCCCTGATCGATACCGGAAGTCGGATGGATGAGGTGATTTTCGAGGAGTTCAAAGGAACCGGCAACATGGAACTTCATTTGGACCGCCGGCTGATGGATAAGCGCGTCTTTCCGGCCATCGACATCAACAAGTCGGGAACAAGAAAAGAAGAGCTGTTGATATCTAGAGAAGATCTCAACCGAATCTGGATACTGCGCAAGGTCTTGTCACAGTTGAGCGTAGTAGAGGCGATGGAGTTCTTATTGGATAAGATTCGTGGGACGCAAACCAACAAGGAGTTCCTTGAATCCATGAACCAATGA
PROTEIN sequence
Length: 433
MVRGQTRAESEAVEENGLNLKSLKEKKISELALIGKNFNIEGAANMRKQELIFAILQAQTEQNGFIYGEGVLETLPDGFGFLRAPDYNYLPGPDDIYVSPSQIRRFNLRTGDIISGHIRPPKEGERYFALLKVEAINYEDPEKARDKILFDNLTPLYPNERFKLEYQPDEYTTRVVDLLTPIGKGQRGLIVAAPRTGKTMMLQNIAKAIAHNHNEAILIVLLIDERPEEVTDMQRSVDGEVVSSTFDEPATRHVQVAEMVIEKAKRLVEHGTDVVILLDSITRLARAYNTVVPPSGKILSGGVDSNALHKPKKFFGAARNIEDGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMELHLDRRLMDKRVFPAIDINKSGTRKEELLISREDLNRIWILRKVLSQLSVVEAMEFLLDKIRGTQTNKEFLESMNQ*