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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_108_21

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(20210..21205)

Top 3 Functional Annotations

Value Algorithm Source
rluD; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) (EC:4.2.1.70) Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 331.0
  • Bit_score: 665
  • Evalue 3.30e-188
Pseudouridine synthase id=1960451 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 332.0
  • Bit_score: 670
  • Evalue 9.50e-190
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 317.0
  • Bit_score: 278
  • Evalue 3.00e-72

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Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGCGGTTGGATCTATTCCTATCGCGTCCTTTCCCTGGCCCCTTGGAGAGGGCGGGCTTGAGTCGCTCCGGTATCCAGAGGGTGATCGCCGAGGGGCAGATCACCCTCAACGGAAGGAAGACCAAGGCCAGCGCCCGTCTGAAGCCCAACGACGCAGTCGAGATCCGGTTGCTGCCTCCACGGGAGACGGCGTTGGTGCCGGAGTCTGTCCCGCTGGATATTCTCTTCGAAGATGAGGATTGCCTGGTAGTGAATAAGCCCGCCGGCATGGTGGTTCATCCTGCTGCCGGTAGGCAAAGCGGAACCCTTGTGAATGCCCTGCTCCATTACTGTCCGAATCTTCAGGGAATCGGAGGGGAGCGGCGCCCCGGGATTGTCCATCGATTGGACAAAGATACCTCCGGGGTGATGGTTGTGGCAAAGCATGATCGGGCCTTTCATCAATTAGCCCAGCAGTTTAAGGAGCGGCGAGTTCGTAAAGAGTACCTCGCCTTTGTGTGGGGTTTAGTCGATCAGCAGAAGGGGAGCATTGATCGTCCCATCGGTCGTCATCGGAGCGACCGGAAAAGGATGTCGAGCCTGCGCTCTGTGCCGCGCTTGAGAGAGGCGCTAACCGAGTGGCAAGTAGAGAATGCTTTCAGGGTAGAGCCTGCAGGAGAGCGGTCTTTTTGGGTCACGTTGCTGCGTCTCAAGCCCCATAGTGGTCGGACGCACCAGATCCGTGTCCATCTGGCGGACCAGGGATATCCGGTGGTTGGGGACCGTATCTATGGGCGGAAGCGGTACGGCCCTGGCGGCAATCGCGAGCCGCTGCCGGGTGTGACGGATTTTCCGCGCCAGGCGCTCCATGCGGAGAGGCTCGGATTCAGCCATCCCCGCACTGGAGCCCCTGTCGCCTTTTACGCCCCGCTTCCGCTCGATATGCAGCGACTCTTAGACTCTCTGAGGGAATGGCATTCAATCAGCGAACGGAGAAAGGTAGGGAAAGGGGGTTGA
PROTEIN sequence
Length: 332
MRLDLFLSRPFPGPLERAGLSRSGIQRVIAEGQITLNGRKTKASARLKPNDAVEIRLLPPRETALVPESVPLDILFEDEDCLVVNKPAGMVVHPAAGRQSGTLVNALLHYCPNLQGIGGERRPGIVHRLDKDTSGVMVVAKHDRAFHQLAQQFKERRVRKEYLAFVWGLVDQQKGSIDRPIGRHRSDRKRMSSLRSVPRLREALTEWQVENAFRVEPAGERSFWVTLLRLKPHSGRTHQIRVHLADQGYPVVGDRIYGRKRYGPGGNREPLPGVTDFPRQALHAERLGFSHPRTGAPVAFYAPLPLDMQRLLDSLREWHSISERRKVGKGG*