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rifcsplowo2_02_scaffold_2881

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_2881_1
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

1..1533
-----------------
DNA (1533bp)
protein (511aa)
Tax=CG_Pacearch_05
rifcsplowo2_02_scaffold_2881_2
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

1535..2173
-----------------
DNA (639bp)
protein (213aa)
Tax=CG_Pacearch_05
rifcsplowo2_02_scaffold_2881_3
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

2170..5673
-----------------
DNA (3504bp)
protein (1168aa)
CARDB protein
CARDB domain-containing protein Tax=CG_Pacearch_05
CARDB domain-containing protein id=5240524 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_02_scaffold_2881_4
unknown

Not on your lists

5691..6167
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2881_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

6204..6596
-----------------
DNA (393bp)
protein (131aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_2881_6
unknown

Not on your lists

6705..6818
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2881_7
unknown

Not on your lists

comp(6837..6980)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2881_8
unknown

Not on your lists

comp(6982..7146)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2881_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7228..7539
-----------------
DNA (312bp)
protein (104aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_2881_10
unknown

Not on your lists

comp(7548..7778)
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2881_11
Clostridium sp. CAG:451, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8075..8647
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:451 RepID=R7KEN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE74246.1}; TaxID=1262809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
rifcsplowo2_02_scaffold_2881_12
unknown

Not on your lists

8675..8812
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2881_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

8855..9691
-----------------
DNA (837bp)
protein (279aa)
peptidase A24B, FlaK domain-containing protein; K07991 archaeal preflagellin peptidase FlaK [EC:3.4.23.52] Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_2881_14
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(9688..10626)
-----------------
DNA (939bp)
protein (313aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] id=35281 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=ACD2
phosphoribosylformylglycinamidine cyclo-ligase
rifcsplowo2_02_scaffold_2881_15

Not on your lists

comp(10628..11242)
-----------------
DNA (615bp)
protein (205aa)
Histidine triad (HIT) protein n=4 Tax=Riemerella anatipestifer RepID=E4T9R9_RIEAD
Marine sediment metagenome DNA, contig: S12H4_S22439 {ECO:0000313|EMBL:GAJ20878.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
histidine triad (hit) protein
rifcsplowo2_02_scaffold_2881_16

Not on your lists

comp(11328..11600)
-----------------
DNA (273bp)
protein (91aa)
Elongation factor 1-beta {ECO:0000256|SAAS:SAAS00044427}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsplowo2_02_scaffold_2881_17
R_RIF_OD1_10_43_37, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(11683..14154)
-----------------
DNA (2472bp)
protein (824aa)
putative type I modification methyltransferase (EC:2.1.1.72)
Type I restriction modification DNA specificity domain protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS23_9FIRM
restriction-modification protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_43_37_curated
rifcsplowo2_02_scaffold_2881_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(14151..15059)
-----------------
DNA (909bp)
protein (303aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C6874
transposase Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_02_scaffold_2881_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

15160..15297
-----------------
DNA (138bp)
protein (46aa)
Tax=CG_Pacearch_06
rifcsplowo2_02_scaffold_2881_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

15642..16571
-----------------
DNA (930bp)
protein (310aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAS3_METIK id=5103126 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
OB-fold tRNA/helicase-type nucleic acid binding protein; K07466 replication factor A1 Tax=RBG_13_Pacearchaeota_36_9_curated
Nucleic acid binding OB-fold tRNA/helicase-type
rifcsplowo2_02_scaffold_2881_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16612..17379
-----------------
DNA (768bp)
protein (256aa)
hypothetical protein
id=3626322 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5102999 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_02_scaffold_2881_22
unknown

Not on your lists

17363..17674
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2881_23
Brachyspira intermedia, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17832..19355)
-----------------
DNA (1524bp)
protein (508aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Brachyspira intermedia (strain ATCC 51140 / PWS/A) RepID=G0EKX4_BRAIP
guaA; bifunctional GMP synthase/glutamine amidotransferase protein
rifcsplowo2_02_scaffold_2881_24
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

19715..20155
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8EEE
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_02_scaffold_2881_25
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

20221..21207
-----------------
DNA (987bp)
protein (329aa)
DNA repair and recombination protein RadA Tax=CG_Pacearch_03
DNA repair and recombination RadA-like protein; K04483 DNA repair protein RadA id=18248692 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DNA repair and recombination protein RadA
Displaying 25 items

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