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RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_42859

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_42859_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3..344)
DNA (342bp) protein (114aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11); K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase id=4082176 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_42859_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(389..1393)
DNA (1005bp) protein (335aa)
ArsR family transcriptional regulator n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039F4B64
two-component hybrid sensor and regulator Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
two-component hybrid sensor and regulator
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_42859_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1380..1790)
DNA (411bp) protein (137aa)
Phytochrome, two-component sensor histidine kinase n=1 Tax=Crocosphaera watsonii WH 0005 RepID=T2IXX0_CROWT
response regulator receiver protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
response regulator receiver protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_42859_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1783..2097)
DNA (315bp) protein (105aa)
cytoplasmic protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
cytoplasmic protein
Hypothetical cytosolic protein id=1937763 bin=GWB2_Nitrospirae_rel_47_37 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_42859_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2314..2757
DNA (444bp) protein (148aa)
Rhodanese-related sulfurtransferase protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Rhodanese-related sulfurtransferase protein id=4583992 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Cycloclasticus taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Rhodanese-related sulfurtransferase protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_42859_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2734..4815)
DNA (2082bp) protein (694aa)
4Fe-4S ferredoxin Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=4583991 bin=GWC2_Deltaproteobacteria_42_51 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
4Fe-4S ferredoxin
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_42859_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4766..6082)
DNA (1317bp) protein (439aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase, subunit F n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ07_9BACT
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_42859_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6119..6487)
DNA (369bp) protein (123aa)
cytochrome b/b6-like Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=4583991 bin=GWC2_Deltaproteobacteria_42_51 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
4Fe-4S ferredoxin
Displaying 8 items

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