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RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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1..414
DNA (414bp) protein (138aa)
DoxX family protein; K15977 putative oxidoreductase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
DoxX family protein; K15977 putative oxidoreductase id=14429532 bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
DoxX family protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(470..1636)
DNA (1167bp) protein (389aa)
yfdZ; pLp-dependent aminotransferase (EC:2.6.1.-); K14261 alanine-synthesizing transaminase [EC:2.6.1.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
yfdZ; pLp-dependent aminotransferase (EC:2.6.1.-)
Aspartate/tyrosine/aromatic aminotransferase id=3754259 bin=GWC2_Deltaproteobacteria_42_51 species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(1729..2634)
DNA (906bp) protein (302aa)
LipA2; lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Lipoyl synthase id=2537285 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
LipA2; lipoyl synthase
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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2881..3867
DNA (987bp) protein (329aa)
ispB; octaprenyl diphosphate synthase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Polyprenyl synthetase id=4925456 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ispB; octaprenyl diphosphate synthase
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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3877..4383
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YFQ9_THEYD
hypothetical protein; K09141 hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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4380..5654
DNA (1275bp) protein (425aa)
diguanylate cyclase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domain-containing protein id=1708238 bin=GWB2_Proteobacteria_55_19 species=Herbaspirillum sp. GW103 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
diguanylate cyclase
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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5765..6748
DNA (984bp) protein (328aa)
Radical SAM domain-containing protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Radical SAM domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI38_DESK7
Radical SAM domain-containing protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(6775..7923)
DNA (1149bp) protein (383aa)
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00036503B4
dnaN; DNA polymerase III subunit beta
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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8349..9203
DNA (855bp) protein (285aa)
Electron transfer flavoprotein, beta subunit/FixA family protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JK98_SYNJB
electron transfer flavoprotein subunit beta/FixA family protein; K03521 electron transfer flavoprotein beta subunit Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
electron transfer flavoprotein subunit beta/FixA family protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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9196..10290
DNA (1095bp) protein (365aa)
Electron transfer flavoprotein, alpha subunit/FixB family protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JK99_SYNJB
electron transfer flavoprotein subunit alpha/FixB family protein; K03522 electron transfer flavoprotein alpha subunit Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
electron transfer flavoprotein subunit alpha/FixB family protein
RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_9554_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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10379..11050
DNA (672bp) protein (224aa)
iron-sulfur cluster-binding protein; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Iron-sulfur cluster-binding protein n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JTX9_SYNJA
iron-sulfur cluster-binding protein
Displaying 11 items

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