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RTP_03222018_0_1um_scaffold_717

Search features with annotation key words

Displaying items 61-85 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_1um_scaffold_717_60
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67438..67980)
DNA (543bp) protein (181aa)
Phosphorylase id=1332587 bin=GWE1_T_denit_62_9 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_61
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68094..68321)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003763841
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_717_62
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68524..68955
DNA (432bp) protein (144aa)
Putative uncharacterized protein id=1332589 bin=GWE1_T_denit_62_9 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_717_63
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69083..71050
DNA (1968bp) protein (656aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase id=1332590 bin=GWE1_T_denit_62_9 species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_717_64
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71146..71874)
DNA (729bp) protein (243aa)
pyridoxine 5''''-phosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00037ABC59
pyridoxine 5'-phosphate synthase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_717_65
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71871..72602)
DNA (732bp) protein (244aa)
DNA repair protein RecO id=1343009 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
recO; DNA repair protein RecO
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_66
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72626..73510)
DNA (885bp) protein (295aa)
GTPase Era n=1 Tax=Thiobacillus denitrificans RepID=UPI0003667916
GTPase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_1um_scaffold_717_67
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73537..74217)
DNA (681bp) protein (227aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 id=1343011 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_68
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74162..74563)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376AB40
transmembrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_717_69
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74574..75383)
DNA (810bp) protein (270aa)
signal peptidase I (EC:3.4.21.89)
signal peptidase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003777F14
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_70
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75389..77188)
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000255|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000255|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000255|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000255|HAMAP-Rule:MF_00071}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
elongation factor 4 n=1 Tax=Thiobacillus thioparus RepID=UPI000375E13F
GTP-binding protein LepA
RTP_03222018_0_1um_scaffold_717_71
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77253..77444)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361400C
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_72
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77548..78948)
DNA (1401bp) protein (467aa)
peptidase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F7178
peptidase S1C, Do
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_73
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78945..79379)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C9E40
positive regulator of sigma E activity
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_717_74
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79387..80343)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365F278
sigma E regulatory protein, MucB/RseB
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_75
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80467..80832)
DNA (366bp) protein (122aa)
hypothetical protein id=12493447 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_76
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80835..81431)
DNA (597bp) protein (199aa)
RNA polymerase sigma factor RpoE n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F16A9
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_1um_scaffold_717_77
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81540..83198
DNA (1659bp) protein (553aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase id=1338457 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_78
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83134..83565)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000380E4EA
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_79
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83618..84646
DNA (1029bp) protein (343aa)
Glycine cleavage T-protein (Aminomethyl transferase) id=1338455 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycine cleavage system protein T
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_80
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84647..84934
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381116C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_717_81
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85028..86095)
DNA (1068bp) protein (356aa)
alanine racemase (EC:5.1.1.1)
alanine racemase n=1 Tax=Thiobacillus thioparus RepID=UPI000374B462
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_82
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86100..87491)
DNA (1392bp) protein (464aa)
primary replicative DNA helicase (EC:3.6.1.-)
DNA helicase n=1 Tax=Thiobacillus thioparus RepID=UPI000362D1F4
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_717_83
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(87626..88075)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 id=1355426 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L9
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_717_84
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(88086..88376)
DNA (291bp) protein (97aa)
30S ribosomal protein S18 id=1355427 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpsR; 30S ribosomal protein S18
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 61-85 of 85 in total

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