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RTP_03222018_0_1um_scaffold_717_76

Organism: RTP_03222018_0_1um_Hydrogenophilales_59_110

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(80835..81431)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F16A9 similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 198.0
  • Bit_score: 374
  • Evalue 6.40e-101
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 198.0
  • Bit_score: 367
  • Evalue 2.20e-99
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 198.0
  • Bit_score: 367
  • Evalue 1.10e-98

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGTCAGACCGCGAATTGGATCAGGTGCTTGTAGAACGCGCCCAACAGGGTGACAAGCGTGCGTTCGAGTTGTTGGTGATCAAATACCAACGCAAGCTCGGGCGGTTATTGTCGCGCATGGTGCGCGATGCGGCGGAAGTGGAAGATATTTCGCAGGAGGCTTTTATCAAGGCCTATCGTGCATTGCCCGGGTTTCGTGGTGAAAGCGCGTTTTATACCTGGTTGTATCGCATCGCCGTCAACACCGCCAAAAATTATCTGGTTGCGCGTAAGCGCCAGCCCGTGTCGAGTGACGTGCTGTCGGAAGATGCGGAAAATTACGAAGATGGGGATATGTTGCGCGATATTGCCACCCCGGATGCGGAACTTCAGTCCAAGCAGATCGCCCAAGCAGTGAATGAGGCAGTTGACGCCCTGCCCGAGGAATTAAGGACCGCTATTACGCTGCGCGAAATCGATGGCATGAGCTACGAGGAAATCGCACAAATGATGGAGTGTCCGATCGGAACCGTGCGGTCGCGGATTTTTCGCGCACGCGAGGCCATTGCGGAAAAAATACGCCCGATGCTGGGCACGAGTCAGGATAAAAGGTGGTAA
PROTEIN sequence
Length: 199
MSDRELDQVLVERAQQGDKRAFELLVIKYQRKLGRLLSRMVRDAAEVEDISQEAFIKAYRALPGFRGESAFYTWLYRIAVNTAKNYLVARKRQPVSSDVLSEDAENYEDGDMLRDIATPDAELQSKQIAQAVNEAVDALPEELRTAITLREIDGMSYEEIAQMMECPIGTVRSRIFRAREAIAEKIRPMLGTSQDKRW*