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RTP_05232018_0_1um_scaffold_150

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_05232018_0_1um_scaffold_150_1

Not on your lists

comp(2..286)
DNA (285bp) protein (95aa)
Integrase of ISARN110, IS91 family (N terminal part) n=1 Tax=mine drainage metagenome RepID=E6QW30_9ZZZZ
Integrase of ISARN110, IS91 family (N terminal part) {ECO:0000313|EMBL:CBI11453.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative integrase
RTP_05232018_0_1um_scaffold_150_2
unknown

Not on your lists

341..481
DNA (141bp) protein (47aa)

This feature has no annotations

RTP_05232018_0_1um_scaffold_150_3
Sulfurospirillum multivorans, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

474..1070
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Acinetobacter calcoaceticus RepID=UPI000349333C
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:AHJ13270.1}; TaxID=1150621 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum multivorans DSM 12446.;"
RTP_05232018_0_1um_scaffold_150_4
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1064..1690
DNA (627bp) protein (209aa)
Amidophosphoribosyltransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BV39_NITHN
amidophosphoribosyltransferase
Amidophosphoribosyltransferase {ECO:0000313|EMBL:CEA15402.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
RTP_05232018_0_1um_scaffold_150_5
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..2680
DNA (975bp) protein (325aa)
SMF family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BV40_NITHN
SMF family protein
SMF family protein {ECO:0000313|EMBL:ADE15390.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
RTP_05232018_0_1um_scaffold_150_6
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3008..3433)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1J8_9PROT
Outer membrane lipoprotein
Outer membrane lipoprotein {ECO:0000313|EMBL:AIY43143.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
RTP_05232018_0_1um_scaffold_150_7
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4022..4756
DNA (735bp) protein (245aa)
Short-chain dehydrogenase (D-alanine transfer protein) n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HZW3_9GAMM
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Gallionellales_60_142_curated
RTP_05232018_0_1um_scaffold_150_8
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5000..5551
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI000374A950
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AEG00522.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
RTP_05232018_0_1um_scaffold_150_9
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5664..8840)
DNA (3177bp) protein (1059aa)
cation transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003699D2E
CzcA family heavy metal efflux pump
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ADL54962.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
RTP_05232018_0_1um_scaffold_150_10
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8854..10389)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A868C
secretion protein HlyD
Tax=BJP_08E140C01_Dechloromonas_61_78
RTP_05232018_0_1um_scaffold_150_11
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10399..11721)
DNA (1323bp) protein (441aa)
Outer membrane efflux protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI3_GALCS
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADL54959.1}; Flags: Precursor;; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
RTP_05232018_0_1um_scaffold_150_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12455..12832
DNA (378bp) protein (126aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU73_9GAMM
Sel1 domain-containing protein repeat-containing protein
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:AEM47925.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
RTP_05232018_0_1um_scaffold_150_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12843..14042
DNA (1200bp) protein (400aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA80_9PROT
purT; phosphoribosylglycinamide formyltransferase
RTP_05232018_0_1um_scaffold_150_14
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14648..16000
DNA (1353bp) protein (451aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B574_9PROT
exodeoxyribonuclease VII large subunit
RTP_05232018_0_1um_scaffold_150_15
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16093..16362
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037DAD17
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
RTP_05232018_0_1um_scaffold_150_16
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16471..18594
DNA (2124bp) protein (708aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase {ECO:0000255|HAMAP-Rule:MF_01595};; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=PNP_METFK
polynucleotide phosphorylase/polyadenylase
RTP_05232018_0_1um_scaffold_150_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18773..19195)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKX6_THIDA
hypothetical protein
Tax=CG_Hydro_01
RTP_05232018_0_1um_scaffold_150_18
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19215..19634)
DNA (420bp) protein (140aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GXD1_METFK
dksA; TraR/DksA family transcriptional regulator
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RTP_05232018_0_1um_scaffold_150_19
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19724..20482
DNA (759bp) protein (253aa)
HAD family hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ALG2_9PROT
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:BAN35529.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_05232018_0_1um_scaffold_150_20
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20600..20998
DNA (399bp) protein (133aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
methionine sulfoxide reductase B n=1 Tax=Thioalkalivibrio sp. ALE30 RepID=UPI00035E8471
peptide methionine sulfoxide reductase msrb
RTP_05232018_0_1um_scaffold_150_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21010..21705
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037376AF
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_05232018_0_1um_scaffold_150_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21773..22735
DNA (963bp) protein (321aa)
Putative hydrolase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJU3_THIDA
hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_05232018_0_1um_scaffold_150_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22728..23036)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJU4_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97055.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_05232018_0_1um_scaffold_150_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23044..24420)
DNA (1377bp) protein (459aa)
DEAD/DEAH box helicase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJU5_THIDA
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AAZ97054.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_05232018_0_1um_scaffold_150_25
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24612..25997
DNA (1386bp) protein (462aa)
outer membrane efflux protein id=12496504 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
outer membrane efflux protein
Tax=CG_Beta_01
RTP_05232018_0_1um_scaffold_150_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26014..27105
DNA (1092bp) protein (364aa)
putative Secretion protein HlyD id=12493230 bin=THIO_HI species=Thiomonas arsenitoxydans genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative Secretion protein HlyD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_05232018_0_1um_scaffold_150_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27098..30379
DNA (3282bp) protein (1094aa)
acriflavin resistance protein id=12496502 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative Multidrug efflux transporter AcrB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_05232018_0_1um_scaffold_150_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30411..30629
DNA (219bp) protein (73aa)
hypothetical protein id=12496501 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_05232018_0_1um_scaffold_150_29
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30639..31052
DNA (414bp) protein (138aa)
Rhodanese domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNE2_SIDLE
rhodanese-like protein
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
RTP_05232018_0_1um_scaffold_150_30
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31101..31307
DNA (207bp) protein (69aa)
Glutaredoxin, GrxC family n=1 Tax=Herbaspirillum sp. CF444 RepID=J2M9T0_9BURK
Glutaredoxin, GrxC family {ECO:0000313|EMBL:EJL94508.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
glutaredoxin GrxC
Displaying items 1-30 of 64 in total

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