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rifcsp10_2_sub10_scaffold_39

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsp10_2_sub10_scaffold_39_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3..740)
DNA (738bp) protein (246aa)
rpoA; DNA-directed RNA polymerase (EC:2.7.7.6)
Putative DNA-directed RNA polymerase subunit A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARQ1_9ARCH
bifunctional DNA-directed RNA polymerase subunit A'/A'' Tax=CSP1_1_Thaumarchaeota
rifcsp10_2_sub10_scaffold_39_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(740..4087)
DNA (3348bp) protein (1116aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=CSP1_1_Thaumarchaeota
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E7I8_9ARCH rbh
rifcsp10_2_sub10_scaffold_39_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(4087..4362)
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit H n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUN3_9ARCH
RNA polymerase Rpb5 Tax=CSP1_1_Thaumarchaeota
RNA polymerase Rpb5
rifcsp10_2_sub10_scaffold_39_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

4512..5339
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KKT1_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
rifcsp10_2_sub10_scaffold_39_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

5403..6308
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A455_NITMS
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
rifcsp10_2_sub10_scaffold_39_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

6390..7208
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUM9_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
rifcsp10_2_sub10_scaffold_39_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(7218..8375)
DNA (1158bp) protein (386aa)
Putative cysteine desulfurase NifS n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EM45_9ARCH rbh
cysteine desulfurase Tax=CSP1_1_Thaumarchaeota
cysteine desulfurase
rifcsp10_2_sub10_scaffold_39_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(8372..9076)
DNA (705bp) protein (235aa)
ATP-utilizing enzyme of the PP-loop superfamily n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RXX6_CENSY
ExsB family protein Tax=CSP1_1_Thaumarchaeota
TIGR00268 family protein
rifcsp10_2_sub10_scaffold_39_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(9073..10305)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000373DB8D rbh
hypothetical protein; K09121 hypothetical protein Tax=CSP1_1_Thaumarchaeota
TIGR00299 family protein
rifcsp10_2_sub10_scaffold_39_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

10396..11310
DNA (915bp) protein (305aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] Tax=CSP1_1_Thaumarchaeota
mdh; Malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=MDH_NITMS
rifcsp10_2_sub10_scaffold_39_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

11347..12129
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0L0_9ARCH rbh
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase Tax=CSP1_1_Thaumarchaeota
phosphoribosylaminoimidazole carboxylase
rifcsp10_2_sub10_scaffold_39_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(12119..12841)
DNA (723bp) protein (241aa)
Putative integral membrane protein DUF125 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG5C13 RepID=B3T8A0_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
putative membrane protein
rifcsp10_2_sub10_scaffold_39_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

12929..14506
DNA (1578bp) protein (526aa)
Radical SAM domain-containing protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKU0_9ARCH
radical SAM protein Tax=CSP1_1_Thaumarchaeota
Radical SAM protein
rifcsp10_2_sub10_scaffold_39_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(14501..14824)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS07_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
rifcsp10_2_sub10_scaffold_39_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(14989..15510)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93I24 RepID=B3T2X2_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
rifcsp10_2_sub10_scaffold_39_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(15573..18779)
DNA (3207bp) protein (1069aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B405_9ARCH rbh
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
rifcsp10_2_sub10_scaffold_39_17

Not on your lists

18894..20246
DNA (1353bp) protein (451aa)
Cation diffusion facilitator family transporter n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B2F7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM21119.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cation diffusion facilitator family transporter
rifcsp10_2_sub10_scaffold_39_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(20260..21438)
DNA (1179bp) protein (393aa)
Putative metal cation transporter n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A4P8_NITMS
metal cation transporter Tax=CSP1_1_Thaumarchaeota
metal cation transporter
rifcsp10_2_sub10_scaffold_39_19
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(21422..22486)
DNA (1065bp) protein (355aa)
Multicopper oxidase type 3 n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A4P9_NITMS rbh
Multicopper oxidase type 3 {ECO:0000313|EMBL:ABX13027.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain
multicopper oxidase type 3 rbh
rifcsp10_2_sub10_scaffold_39_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

22641..23150
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARC7_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
rifcsp10_2_sub10_scaffold_39_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(23143..23415)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAK4_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
rifcsp10_2_sub10_scaffold_39_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(23460..24809)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARN2_9ARCH rbh
von Willebrand factor type A Tax=CSP1_1_Thaumarchaeota
von Willebrand factor type A
rifcsp10_2_sub10_scaffold_39_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(24796..26424)
DNA (1629bp) protein (543aa)
Mg-chelatase subunit n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARJ6_9ARCH rbh
Mg-chelatase subunit Tax=CSP1_1_Thaumarchaeota
Mg-chelatase subunit
rifcsp10_2_sub10_scaffold_39_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists


26518..27111
DNA (594bp) protein (198aa)
30S ribosomal protein S13 n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E857_9ARCH
rps13p; 30S ribosomal protein S13 Tax=CSP1_1_Thaumarchaeota
rps; 30S ribosomal protein S13
Displaying 24 items

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