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RifSed_csp1_10ft_2_scaffold_2083

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_10ft_2_scaffold_2083_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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1..873
DNA (873bp) protein (291aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEP3_PYRF1
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_10ft_2_scaffold_2083_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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849..1538
DNA (690bp) protein (230aa)
lysyl-tRNA synthetase, archaeal and spirochete (EC:6.1.1.6) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_10ft_2_scaffold_2083_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1548..2420)
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Paenibacillus barengoltzii G22 RepID=R9LDH0_9BACL
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
RifSed_csp1_10ft_2_scaffold_2083_trna_1
unknown

Not on your lists

2522..2619
DNA (98bp)
transferRNA Gln
RifSed_csp1_10ft_2_scaffold_2083_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2721..3647)
DNA (927bp) protein (309aa)
lipid kinase Tax=Desulfitobacterium sp. PCE1 RepID=UPI00037CF452
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_10ft_2_scaffold_2083_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3640..5268)
DNA (1629bp) protein (543aa)
Glycerol-3-phosphate dehydrogenase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_10ft_2_scaffold_2083_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(5265..6920)
DNA (1656bp) protein (552aa)
alkylglycerone-phosphate synthase (EC:2.5.1.26)
Alkylglycerone-phosphate synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZI0_CONWI
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_10ft_2_scaffold_2083_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7025..8182
DNA (1158bp) protein (386aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FS0_METBF
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_10ft_2_scaffold_2083_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8195..8968)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMJ7_ACIS0
RDD domain containing protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_10ft_2_scaffold_2083_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9068..9823)
DNA (756bp) protein (252aa)
RNA 2'-phosphotransferase, Tpt1 / KptA family protein Tax=mine drainage metagenome RepID=T1BL17_9ZZZZ
RNA 2'-phosphotransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_10ft_2_scaffold_2083_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9795..10862)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003724D8B
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_10ft_2_scaffold_2083_11
unknown

Not on your lists

comp(10856..11122)
DNA (267bp) protein (89aa)

This feature has no annotations

RifSed_csp1_10ft_2_scaffold_2083_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

11392..11778
DNA (387bp) protein (129aa)
Small heat shock protein Tax=uncultured organism RepID=M1PPL4_9ZZZZ
small heat shock protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_10ft_2_scaffold_2083_13
unknown

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11818..12057
DNA (240bp) protein (80aa)

This feature has no annotations

RifSed_csp1_10ft_2_scaffold_2083_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12054..12971
DNA (918bp) protein (306aa)
hypothetical protein Tax=Sulfolobales archaeon Acd1 RepID=UPI0003722454
phage SPO1 DNA polymerase-related protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_10ft_2_scaffold_2083_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12928..13047)
DNA (120bp) protein (40aa)
phosphoesterase Tax=Streptomyces violaceoniger RepID=UPI0003C76D7C
PHP domain-containing protein
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 16 items

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