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RifSed_csp1_13ft_1_scaffold_7359

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_1_scaffold_7359_1
unknown

Not on your lists

comp(2..373)
DNA (372bp) protein (124aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_7359_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

575..748
DNA (174bp) protein (58aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T0YA40_9ZZZZ
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

801..1886
DNA (1086bp) protein (362aa)
Deoxyhypusine synthase-like protein bin=GWF2_OP9-related_38_17 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
deoxyhypusine synthase-like protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_7359_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1873..2355)
DNA (483bp) protein (161aa)
dusP; dual specificity protein phosphatase (EC:3.1.3.16)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00031F16B1
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

2493..3080
DNA (588bp) protein (196aa)
Uncharacterized protein Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T929_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_7359_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3126..3737
DNA (612bp) protein (204aa)
Riboflavin biosynthesis protein RibBA Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LG32_9FIRM
GTP cyclohydrolase II
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3738..4223)
DNA (486bp) protein (162aa)
Pyruvate/oxaloacetate carboxyltransferase Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QUH2_SPHPG
pyruvate/oxaloacetate carboxyltransferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4195..5730)
DNA (1536bp) protein (512aa)
Pyruvate carboxyl transferase subunit A (EC:6.4.1.1)
Pyruvate carboxylase subunit A Tax=Methanosarcina barkeri RepID=Q46C58_METBF
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5842..6390
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon I-plasma RepID=T0MN93_9EURY
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6487..6828
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Haloarcula RepID=Q5V7D6_HALMA
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

6840..7199
DNA (360bp) protein (120aa)
Putative Amicyanin Tax=Pandoraea sp. SD6-2 RepID=R7WW18_9BURK
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_7359_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(7259..8368)
DNA (1110bp) protein (370aa)
Uncharacterized protein Tax=Amycolatopsis azurea DSM 43854 RepID=M2QRP1_9PSEU
amidohydrolase
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_1_scaffold_7359_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8841..9425
DNA (585bp) protein (195aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_7359_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

9489..10205
DNA (717bp) protein (239aa)
UgpQ; glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] bin=bin1_lowGC species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
glycerophosphoryl diester phosphodiesterase
Tax=CSP1_2_Dadabacteria
RifSed_csp1_13ft_1_scaffold_7359_15
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(10230..10703)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JC11_ANAD2
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
RifSed_csp1_13ft_1_scaffold_7359_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10722..12278)
DNA (1557bp) protein (519aa)
cap:CLDAP_21610 pccB; propionyl-CoA carboxylase subunit beta bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
pccB; propionyl-CoA carboxylase subunit beta
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_7359_17
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12310..13089)
DNA (780bp) protein (260aa)
Putative integral membrane protein Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0ICZ5_9EURY
Putative integral membrane protein {ECO:0000313|EMBL:ELZ94640.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-897.;"
putative integral membrane protein
RifSed_csp1_13ft_1_scaffold_7359_18
unknown

Not on your lists

13176..13913
DNA (738bp) protein (246aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_7359_19
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(13876..14556)
DNA (681bp) protein (227aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
RifSed_csp1_13ft_1_scaffold_7359_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14634..15029)
DNA (396bp) protein (132aa)
Methylmalonyl-CoA epimerase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKX2_MARHT
methylmalonyl-CoA epimerase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15026..16675)
DNA (1650bp) protein (550aa)
Methylmalonyl-CoA mutase, N-terminal domain/subunit Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UEX9_FERPD
methylmalonyl-CoA mutase, N-terminal domain/subunit
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_7359_22
unknown

Not on your lists

16842..17234
DNA (393bp) protein (131aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_7359_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(17231..17575)
DNA (345bp) protein (115aa)
Putative glutaconate CoA-transferase, beta subunit Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FGB6_DESAA
glutaconate CoA-transferase
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_7359_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(17614..18633)
DNA (1020bp) protein (340aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
phosphoribosylaminoimidazole synthetase Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B2CBD
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(18873..19208)
DNA (336bp) protein (112aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_7359_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

19362..19841
DNA (480bp) protein (160aa)
PREDICTED: putative ribosomal RNA methyltransferase 2-like Tax=Pantholops hodgsonii RepID=UPI0003C16653
cell division protein J
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_7359_27
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(19838..21019)
DNA (1182bp) protein (394aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MI61_9EURY
TPR domain protein, putative component of TonB system
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_7359_28
unknown

Not on your lists

21202..21921
DNA (720bp) protein (240aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_7359_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

21926..23236
DNA (1311bp) protein (437aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_7359_30
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

23414..23770
DNA (357bp) protein (119aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 33 in total

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