ggKbase home page

RifSed_csp1_13ft_1_scaffold_8004

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_1_scaffold_8004_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..617)
DNA (615bp) protein (205aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036653CE
DNA polymerase sliding clamp
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_8004_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(683..1006)
DNA (324bp) protein (108aa)
transcription termination factor Tfs (EC:2.7.7.6)
DNA-directed RNA polymerase subunit Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RF97_METVM
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_8004_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1046..1984)
DNA (939bp) protein (313aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C9B4D
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_8004_4
unknown

Not on your lists

comp(2063..2203)
DNA (141bp) protein (47aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_8004_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2284..2622)
DNA (339bp) protein (113aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_8004_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2635..3435)
DNA (801bp) protein (267aa)
lsrF; putative aldolase LsrF (EC:4.1.2.-)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00036D6B23
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_8004_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3500..4522)
DNA (1023bp) protein (341aa)
L-iditol 2-dehydrogenase Tax=Acidianus hospitalis (strain W1) RepID=F4B9N5_ACIHW
L-iditol 2-dehydrogenase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_8004_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4648..5997
DNA (1350bp) protein (450aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037249A6
putative Na(+)/H(+) antiporter
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_8004_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(6058..6390)
DNA (333bp) protein (111aa)
Cupin 2 conserved barrel domain protein bin=GWF2_WWE1_40_14 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1
cupin
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_1_scaffold_8004_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6495..7367)
DNA (873bp) protein (291aa)
Pirin domain protein bin=GWF2_Lentisphaerae_50_93 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
pirin domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_1_scaffold_8004_trna_1
unknown

Not on your lists

comp(7425..7532)
DNA (108bp)
transferRNA Tyr
RifSed_csp1_13ft_1_scaffold_8004_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

7810..8361
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1D899_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 12 items

View Taxonomy