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RifSed_csp1_13ft_1_scaffold_20404

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_1_scaffold_20404_1
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

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1..186
DNA (186bp) protein (62aa)
MIP family channel protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBS8_9CHLR
major intrinsic protein
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
RifSed_csp1_13ft_1_scaffold_20404_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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295..1083
DNA (789bp) protein (263aa)
Oxidoreductase FAD/NAD(P)-binding protein bin=GWA2_OP3_52_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
oxidoreductase FAD/NAD(P)-binding protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_20404_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1093..1608)
DNA (516bp) protein (172aa)
Nitrite reductase (NO-forming) Tax=Afipia sp. 1NLS2 RepID=D6V265_9BRAD
Copper-containing nitrite reductase {ECO:0000313|EMBL:CEG07500.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
RifSed_csp1_13ft_1_scaffold_20404_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1715..2242
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ08_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43245.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
RifSed_csp1_13ft_1_scaffold_20404_5
unknown

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2255..2437
DNA (183bp) protein (61aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_20404_6

Not on your lists

2524..3024
DNA (501bp) protein (167aa)
Ni-containing superoxide dismutase, putative Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CC21_ACAM1
Uncharacterized protein {ECO:0000313|EMBL:KKW13119.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
nickel-containing superoxide dismutase (NISOD)
RifSed_csp1_13ft_1_scaffold_20404_7
RHI_RIF-OD1-04_45_11b, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

3027..3440
DNA (414bp) protein (138aa)
Signal peptidase I Tax=uncultured bacterium RepID=K2CD32_9BACT
signal peptidase I
Tax=RIFCSPHIGHO2_12_FULL_RIF-OD1-04_45_11b_curated
RifSed_csp1_13ft_1_scaffold_20404_8
R_Omnitrophica_45_10b, Omnitrophica, Bacteria

Not on your lists

3523..3999
DNA (477bp) protein (159aa)
Ferritin Dps family protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYI8_9ARCH
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
RifSed_csp1_13ft_1_scaffold_20404_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4049..4708
DNA (660bp) protein (220aa)
thermostable 8-oxoguanine DNA glycosylase bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_20404_10
unknown

Not on your lists

comp(4546..4866)
DNA (321bp) protein (107aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_20404_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4880..5536
DNA (657bp) protein (219aa)
A/G-specific adenine glycosylase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NN1_SYMTH
A/G-specific adenine glycosylase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_1_scaffold_20404_12
unknown

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5619..5792
DNA (174bp) protein (58aa)

This feature has no annotations

RifSed_csp1_13ft_1_scaffold_20404_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5837..6097
DNA (261bp) protein (87aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase Tax=Uncultured methanogenic archaeon RC-I RepID=TRMY_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 13 items

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