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RifSed_csp1_13ft_2_scaffold_535

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_2_scaffold_535_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(117..1166)
DNA (1050bp) protein (350aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RTCA_NITMU
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_2_scaffold_535_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(1163..3916)
DNA (2754bp) protein (918aa)
calcium-translocating P-type ATPase (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKU3_DESK7
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_2_scaffold_535_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3995..4633)
DNA (639bp) protein (213aa)
Zn-dependent hydrolases, including glyoxylases bin=bin3_NC10 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin3_NC10 organism_group=NC10
metallo-beta-lactamase family protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_2_scaffold_535_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

4750..6402
DNA (1653bp) protein (551aa)
hypothetical protein bin=bin9_gal15 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
RifSed_csp1_13ft_2_scaffold_535_5
unknown

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comp(6407..7132)
DNA (726bp) protein (242aa)

This feature has no annotations

RifSed_csp1_13ft_2_scaffold_535_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(7157..7714)
DNA (558bp) protein (186aa)
Cytoplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=Thermotoga sp. EMP genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hemerythrin HHE cation binding protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_2_scaffold_535_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7854..8036
DNA (183bp) protein (61aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_2_scaffold_535_trna_1
unknown

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comp(8057..8150)
DNA (94bp)
transferRNA Gly
RifSed_csp1_13ft_2_scaffold_535_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8224..8481)
DNA (258bp) protein (86aa)
UPF0147 protein MMINT_16370 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8A0_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_2_scaffold_535_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8514..8831)
DNA (318bp) protein (106aa)
Transcriptional regulator, AsnC family Tax=mine drainage metagenome RepID=T1BG18_9ZZZZ
transcriptional regulator, AsnC family
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_2_scaffold_535_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8890..9642)
DNA (753bp) protein (251aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_2_scaffold_535_11
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

9675..10433
DNA (759bp) protein (253aa)
glycine/D-amino acid oxidase, deaminating bin=bin9_gal15 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
FAD dependent oxidoreductase
Tax=CSP1_3_Armatimonadetes
Displaying 12 items

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