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RifSed_csp1_13ft_3_scaffold_149

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_3_scaffold_149_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3..1634
DNA (1632bp) protein (544aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003618690
thermosome subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_2
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

1664..2095
DNA (432bp) protein (144aa)
Heat shock protein Hsp20 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICU4_ACIB4
heat shock protein Hsp20
Tax=RBG_13_Euryarchaeota_31_8_curated
RifSed_csp1_13ft_3_scaffold_149_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2102..2623
DNA (522bp) protein (174aa)
Protein GrpE Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1N5_SPHTD
GrpE protein HSP-70 cofactor
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2616..4457
DNA (1842bp) protein (614aa)
Chaperone protein DnaK Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=DNAK_METTP
dnaK; molecular chaperone DnaK
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4494..5660
DNA (1167bp) protein (389aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DDC8D
Chaperone protein DnaJ
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_6
unknown

Not on your lists

comp(5665..5766)
DNA (102bp) protein (34aa)

This feature has no annotations

RifSed_csp1_13ft_3_scaffold_149_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5960..6703
DNA (744bp) protein (248aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036F1B3B
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6725..7156)
DNA (432bp) protein (144aa)
transcriptional regulator, ArsR family
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_9
unknown

Not on your lists

7286..7378
DNA (93bp) protein (31aa)

This feature has no annotations

RifSed_csp1_13ft_3_scaffold_149_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7375..8499
DNA (1125bp) protein (375aa)
Uncharacterized protein Tax=Bacillus amyloliquefaciens RepID=E1UQ23_BACAS
yhbF; hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8560..10770
DNA (2211bp) protein (737aa)
ATPase AAA (EC:3.6.1.3)
AAA family ATPase, CDC48 subfamily Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH46_ACIB4
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_3_scaffold_149_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

10839..11483
DNA (645bp) protein (215aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_3_scaffold_149_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

11565..11813
DNA (249bp) protein (83aa)
PRC-barrel domain-containing protein Tax=uncultured organism RepID=M1PV71_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11824..11982)
DNA (159bp) protein (53aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_149_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12042..13511)
DNA (1470bp) protein (490aa)
Band 7 protein Tax=Pedosphaera parvula Ellin514 RepID=B9XG84_9BACT
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13536..14120)
DNA (585bp) protein (195aa)
hypothetical protein PJC66_10429 bin=GWC2_Clostridiales_40_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
membrane protease regulatory membrane protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14125..14730)
DNA (606bp) protein (202aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14829..15284)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00036A1C69
Transcription regulator, Lrp/AsnC family
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(15480..16358)
DNA (879bp) protein (293aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036F7B48
heat shock protein HtpX
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(16436..18205)
DNA (1770bp) protein (590aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C81D5
RNA-binding protein-like protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_149_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18513..18692
DNA (180bp) protein (60aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 21 items

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