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RifSed_csp1_13ft_4_scaffold_459

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_4_scaffold_459_trna_4
unknown

Not on your lists

comp(108..182)
DNA (75bp)
transferRNA Arg
RifSed_csp1_13ft_4_scaffold_459_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(206..832)
DNA (627bp) protein (209aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_4_scaffold_459_trna_3
unknown

Not on your lists

comp(902..973)
DNA (72bp)
transferRNA Gly
RifSed_csp1_13ft_4_scaffold_459_2
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

1087..1620
DNA (534bp) protein (178aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
RifSed_csp1_13ft_4_scaffold_459_3
unknown

Not on your lists

comp(1453..1845)
DNA (393bp) protein (131aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_459_4
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

1870..2250
DNA (381bp) protein (127aa)
Transposase, IS605 OrfB family Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPT5_ARCVS
transposase, IS605 OrfB family
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
RifSed_csp1_13ft_4_scaffold_459_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2379..2510)
DNA (132bp) protein (44aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_6
unknown

Not on your lists

comp(2594..2836)
DNA (243bp) protein (81aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_459_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2869..4626)
DNA (1758bp) protein (586aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000366EEFC
archaeosine tRNA-ribosyltransferase type 2
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_459_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4687..5199)
DNA (513bp) protein (171aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000381145C
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5421..6146
DNA (726bp) protein (242aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1J9Q0_9ARCH
mtaP; methylthioadenosine phosphorylase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_459_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6143..7396
DNA (1254bp) protein (418aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase (EC:3.5.4.28)
5-methylthioadenosine/S-adenosylhomocysteine deaminase Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KT74_ARCVS
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7402..7965
DNA (564bp) protein (188aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000380F25E
adenine phosphoribosyltransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(7962..9260)
DNA (1299bp) protein (433aa)
Sodium/hydrogen exchanger Tax=Methanofollis liminatans DSM 4140 RepID=J1KZP0_9EURY
sodium/hydrogen exchanger
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_4_scaffold_459_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9278..9688
DNA (411bp) protein (137aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9701..9835)
DNA (135bp) protein (45aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9931..10344)
DNA (414bp) protein (138aa)
Putative transcriptional regulator Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T9T6_9EURY
putative transcriptional regulator
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10409..10753)
DNA (345bp) protein (115aa)
Putative transcriptional regulator Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T9T6_9EURY
putative transcriptional regulator
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10815..12407)
DNA (1593bp) protein (531aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036FC6DA
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_18
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12499..13227)
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECM1_PYRF1
Uncharacterized conserved protein {ECO:0000313|EMBL:GAN32064.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
RifSed_csp1_13ft_4_scaffold_459_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13237..15024
DNA (1788bp) protein (596aa)
phP C-terminal domain-containing protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
PHP domain protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14981..16066)
DNA (1086bp) protein (362aa)
uracil-DNA glycosylase, family 4 (EC:2.7.7.7)
Phage SPO1 DNA polymerase-related protein Tax=uncultured prokaryote RepID=H5SI33_9ZZZZ
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_459_21
unknown

Not on your lists

comp(16063..16302)
DNA (240bp) protein (80aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_459_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(16342..16728)
DNA (387bp) protein (129aa)
Small heat shock protein Tax=uncultured organism RepID=M1PPL4_9ZZZZ
small heat shock protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(17015..17383)
DNA (369bp) protein (123aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17501..18325
DNA (825bp) protein (275aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003724D8B
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18297..19052
DNA (756bp) protein (252aa)
RNA 2'-phosphotransferase, Tpt1 / KptA family protein Tax=mine drainage metagenome RepID=T1BL17_9ZZZZ
RNA 2'-phosphotransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

19152..19925
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMJ7_ACIS0
RDD domain containing protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_459_27
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(19938..21095)
DNA (1158bp) protein (386aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FS0_METBF
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_4_scaffold_459_28
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

21200..22855
DNA (1656bp) protein (552aa)
alkylglycerone-phosphate synthase (EC:2.5.1.26)
Alkylglycerone-phosphate synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZI0_CONWI
Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying items 1-30 of 46 in total

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