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RifSed_csp1_13ft_4_scaffold_2281

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_4_scaffold_2281_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2..415)
DNA (414bp) protein (138aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_2281_2

Not on your lists

comp(473..1378)
DNA (906bp) protein (302aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T0ZY46_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD53141.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
antirepressor regulating drug resistance protein
RifSed_csp1_13ft_4_scaffold_2281_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1375..1731)
DNA (357bp) protein (119aa)
Transcriptional repressor, CopY family Tax=mine drainage metagenome RepID=T1AHX0_9ZZZZ
CopY family transcriptional repressor
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_4_scaffold_2281_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1855..2655
DNA (801bp) protein (267aa)
Fe-S-cluster-containing hydrogenase subunit bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Fe-S-cluster-containing hydrogenase subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_2281_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2660..3985
DNA (1326bp) protein (442aa)
Polysulfide reductase bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
polysulfide reductase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_2281_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3982..5106
DNA (1125bp) protein (375aa)
DOMON domain-containing protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
DOMON domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_2281_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5103..6530
DNA (1428bp) protein (476aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_2281_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6527..8149
DNA (1623bp) protein (541aa)
hypothetical protein Tax=Ureibacillus thermosphaericus RepID=UPI000373D560
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_2281_9
unknown

Not on your lists

8316..8648
DNA (333bp) protein (111aa)

This feature has no annotations

RifSed_csp1_13ft_4_scaffold_2281_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8929..10119
DNA (1191bp) protein (397aa)
Geranylgeranyl reductase Tax=mine drainage metagenome RepID=T1BI75_9ZZZZ
Digeranylgeranylglycerophospholipid reductase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_2281_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10252..11019)
DNA (768bp) protein (256aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037DC7E7
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_2281_12
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11219..11884)
DNA (666bp) protein (222aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-J15 RepID=UPI000376A102
Cell surface protein {ECO:0000313|EMBL:AKB38589.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
surface layer protein B
RifSed_csp1_13ft_4_scaffold_2281_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11893..12189)
DNA (297bp) protein (99aa)
fibronectin type III domain-containing protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_4_scaffold_2281_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12585..12947)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Mycobacterium RepID=A1UKC8_MYCSK
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_4_scaffold_2281_trna_1
unknown

Not on your lists

comp(13275..13380)
DNA (106bp)
transferRNA Lys
RifSed_csp1_13ft_4_scaffold_2281_15
unknown

Not on your lists

comp(13429..13683)
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying 16 items

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