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RifSed_csp1_16ft_1_scaffold_4504

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_1_scaffold_4504_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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97..495
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000373A8AA
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_1_scaffold_4504_2

Not on your lists

comp(841..1209)
DNA (369bp) protein (123aa)
HxlR family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T1BGL7_9ZZZZ
HxlR family transcriptional regulator {ECO:0000313|EMBL:EQD67768.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RifSed_csp1_16ft_1_scaffold_4504_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1478..2887
DNA (1410bp) protein (470aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
merA1; mercuric reductase (EC:1.16.1.1)
Mercuric reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGG9_NITGG
RifSed_csp1_16ft_1_scaffold_4504_4
unknown

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comp(3133..3261)
DNA (129bp) protein (43aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_4504_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3319..6510)
DNA (3192bp) protein (1064aa)
putative molybdopterin oxidoreductase molybdopterin binding subunit; K08357 tetrathionate reductase subunit A id=14429162 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
putative molybdopterin oxidoreductase molybdopterin binding subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_4504_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(6507..7634)
DNA (1128bp) protein (376aa)
Polysulphide reductase NrfD n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEY5_ANADF
polysulfide reductase NrfD
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_4504_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7631..8482)
DNA (852bp) protein (284aa)
Molybdenum protein medium subunit n=1 Tax=Vibrio campbellii (strain ATCC BAA-1116 / BB120) RepID=A7MYH7_VIBCB
molybdenum protein medium subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_4504_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8624..9802
DNA (1179bp) protein (393aa)
proteasome subunit alpha 1 (EC:3.4.25.1)
Proteasome, subunit alpha n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY1_NITGG
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_1_scaffold_4504_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9887..10429
DNA (543bp) protein (181aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUR4_ROSS1
ATP--cobalamin adenosyltransferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_4504_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10421..11494)
DNA (1074bp) protein (358aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase (EC:2.4.1.227)
Glycosyltransferase 28 domain n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQI2_9ARCH
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_4504_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11600..12664
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A36A4
DNA primase large subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_4504_12
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(12618..13238)
DNA (621bp) protein (207aa)
Phosphatidylglycerophosphate synthase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBW0_9EURY
Phosphatidylglycerophosphate synthase
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:AGN27176.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
RifSed_csp1_16ft_1_scaffold_4504_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13229..13759)
DNA (531bp) protein (177aa)
adenylate kinase (EC:2.7.4.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B963D
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_16ft_1_scaffold_4504_14
unknown

Not on your lists

13801..14472
DNA (672bp) protein (224aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_4504_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14488..15375)
DNA (888bp) protein (296aa)
Putative CcmB protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBR0_9ZZZZ
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_16ft_1_scaffold_4504_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15372..16310)
DNA (939bp) protein (313aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter-like protein id=14630841 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_16ft_1_scaffold_4504_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(16391..17884)
DNA (1494bp) protein (498aa)
Carbohydrate binding family 6 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RQ51_METFO
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_16ft_1_scaffold_4504_18
R_RIF_OD1_02_44_13, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

18008..19393
DNA (1386bp) protein (462aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_02_44_13_curated
RifSed_csp1_16ft_1_scaffold_4504_19
unknown

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comp(19390..20139)
DNA (750bp) protein (250aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_4504_20
unknown

Not on your lists

comp(20321..20548)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 20 items

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