ggKbase home page

RifSed_csp1_16ft_1_scaffold_15036

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_1_scaffold_15036_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_15036_2
unknown

Not on your lists

194..541
DNA (348bp) protein (116aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_15036_3
unknown

Not on your lists

538..768
DNA (231bp) protein (77aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_15036_4
unknown

Not on your lists

832..1002
DNA (171bp) protein (57aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_15036_5
unknown

Not on your lists

1037..1210
DNA (174bp) protein (58aa)

This feature has no annotations

RifSed_csp1_16ft_1_scaffold_15036_trna_1
unknown

Not on your lists

comp(1313..1379)
DNA (67bp)
transferRNA Pseudo
RifSed_csp1_16ft_1_scaffold_15036_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1538..3073
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Thermus scotoductus RepID=UPI00035EFB7D
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AEN73411.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
RifSed_csp1_16ft_1_scaffold_15036_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3238..3423)
DNA (186bp) protein (62aa)
30S ribosomal protein S27ae n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS27A_METKA
RPS31; ribosomal protein S27AE
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_15036_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3423..3917)
DNA (495bp) protein (165aa)
Ribosomal protein S24E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9G0_9EURY
ribosomal protein S24E
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_16ft_1_scaffold_15036_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3919..4464)
DNA (546bp) protein (182aa)
UPI0003D1C685 related cluster n=1 Tax=unknown RepID=UPI0003D1C685
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_15036_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(4430..4621)
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D5438
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_16ft_1_scaffold_15036_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(4627..5190)
DNA (564bp) protein (188aa)
rpoE1; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036EEDE2
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_1_scaffold_15036_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5251..7149)
DNA (1899bp) protein (633aa)
V-type H(+)-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=14425970 bin=bin1_lowGC species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
Pyrophosphate-energized proton pump
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 13 items

View Taxonomy