ggKbase home page

RifSed_csp1_16ft_2_scaffold_6712

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_6712_1
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

1..849
DNA (849bp) protein (283aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S208_FERPA
Tax=RBG_13_Euryarchaeota_57_23_curated
RifSed_csp1_16ft_2_scaffold_6712_2
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

941..1546
DNA (606bp) protein (202aa)
ArsR family transcriptional regulator Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUE6_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KKU12785.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
ArsR family transcriptional regulator
RifSed_csp1_16ft_2_scaffold_6712_3
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

1575..1910
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU12786.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
RifSed_csp1_16ft_2_scaffold_6712_4
unknown

Not on your lists

comp(1962..2078)
DNA (117bp) protein (39aa)

This feature has no annotations

RifSed_csp1_16ft_2_scaffold_6712_5
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(2038..2322)
DNA (285bp) protein (95aa)
Transcriptional regulator, AbrB family Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0B2_THEPD
AbrB family transcriptional regulator
Tax=RBG_16_Thaumarchaeota_49_8_curated
RifSed_csp1_16ft_2_scaffold_6712_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2348..2842)
DNA (495bp) protein (165aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_2_scaffold_6712_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2847..3167)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAK3_9EURY
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_2_scaffold_6712_8
unknown

Not on your lists

3594..3839
DNA (246bp) protein (82aa)
putative transcription regulator AbrB/SpoV
RifSed_csp1_16ft_2_scaffold_6712_9
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3852..4190
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSP3_METHJ
hypothetical protein
Tax=BJP_S1_SUB10_Methanoculleus_61_9
RifSed_csp1_16ft_2_scaffold_6712_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4309..4791)
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Thermococcus sp. CL1 RepID=I3ZWT5_9EURY
hypothetical protein containing PIN domain 19
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_2_scaffold_6712_11
unknown

Not on your lists

comp(4733..5134)
DNA (402bp) protein (134aa)

This feature has no annotations

RifSed_csp1_16ft_2_scaffold_6712_12
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5480..6001)
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR78589.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
RifSed_csp1_16ft_2_scaffold_6712_13
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(6090..6425)
DNA (336bp) protein (112aa)
Tax=CG_Elusi_02
RifSed_csp1_16ft_2_scaffold_6712_14
unknown

Not on your lists

6987..7466
DNA (480bp) protein (160aa)

This feature has no annotations

RifSed_csp1_16ft_2_scaffold_6712_15
unknown

Not on your lists

7625..8005
DNA (381bp) protein (127aa)

This feature has no annotations

RifSed_csp1_16ft_2_scaffold_6712_16

Not on your lists

8527..9162
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2W7_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KKN08621.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RifSed_csp1_16ft_2_scaffold_6712_17
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

9159..9551
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2W8_FERPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC64601.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
Displaying 17 items

View Taxonomy