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RifSed_csp1_16ft_2_scaffold_13481

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_13481_1
unknown

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comp(1..360)
DNA (360bp) protein (120aa)

This feature has no annotations

RifSed_csp1_16ft_2_scaffold_13481_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(376..1248)
DNA (873bp) protein (291aa)
Branched-chain amino acid aminotransferase, group I {ECO:0000313|EMBL:KCZ71477.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KCZ71477.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EA45_METEZ
RifSed_csp1_16ft_2_scaffold_13481_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1499..1873
DNA (375bp) protein (125aa)
Transcriptional regulator, TrmB Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7K3_METTP
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71478.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
transcriptional regulator, TrmB
RifSed_csp1_16ft_2_scaffold_13481_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1925..2599)
DNA (675bp) protein (225aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAM9_METEZ
3,4-dihydroxy-2-butanone 4-phosphate synthase
RifSed_csp1_16ft_2_scaffold_13481_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2596..3243)
DNA (648bp) protein (216aa)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; CTP:riboflavin 5'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01285}; Flavokinase {ECO:0000256|HAMAP-Rule:MF_01285}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Riboflavin kinase Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BGD0_9EURY
CTP-dependent riboflavin kinase
RifSed_csp1_16ft_2_scaffold_13481_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3302..4108)
DNA (807bp) protein (269aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6W6_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_13481_7

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4228..6033
DNA (1806bp) protein (602aa)
Predicted signal transduction histidine kinase Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Y7_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KKM85796.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
signal transduction histidine kinase
RifSed_csp1_16ft_2_scaffold_13481_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6033..6674
DNA (642bp) protein (214aa)
Putative PAS/PAC sensor protein Tax=Methanobacterium sp. (strain AL-21) RepID=F0T5Z5_METSL
putative PAS/PAC sensor protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 8 items

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