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RifSed_csp1_16ft_3_scaffold_19046

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_19046_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2..1069
DNA (1068bp) protein (356aa)
Molybdenum cofactor synthesis domain protein Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGE1_ARCPA
molybdenum cofactor synthesis protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_16ft_3_scaffold_19046_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1049..1624)
DNA (576bp) protein (192aa)
Kae1-associated kinase Bud32 {ECO:0000313|EMBL:KCZ72249.1}; EC=2.7.1.- {ECO:0000313|EMBL:KCZ72249.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPT4_METZD
Suspect SCG annotation. See neighboring gene [RifSed_csp1_16ft_3_scaffold_19046_3].
RifSed_csp1_16ft_3_scaffold_19046_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1615..2589)
DNA (975bp) protein (325aa)
gcp; DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
UPI0003D1B28B related cluster Tax=unknown RepID=UPI0003D1B28B
Metallohydrolase, glycoprotease/Kae1 family {ECO:0000313|EMBL:KCZ71999.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_19046_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2761..2997
DNA (237bp) protein (79aa)
Translation initiation factor 1A 1 Tax=Methanosarcina RepID=IF1A1_METAC
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Translation initiation factor 1A
RifSed_csp1_16ft_3_scaffold_19046_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3006..3797
DNA (792bp) protein (264aa)
Serine/threonine protein kinase involved in cell cycle control {ECO:0000313|EMBL:KCZ71997.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KCZ71997.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MNP4_9EURY
protein of unknown function RIO1
RifSed_csp1_16ft_3_scaffold_19046_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3794..4333
DNA (540bp) protein (180aa)
KH domain protein Tax=Methanolobus psychrophilus R15 RepID=K4ME47_9EURY
KH domain protein {ECO:0000313|EMBL:KCZ71996.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
KH domain protein
RifSed_csp1_16ft_3_scaffold_19046_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4376..4882
DNA (507bp) protein (169aa)
Formaldehyde-activating enzyme Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=FAE_METBF
formaldehyde-activating enzyme
Formaldehyde activating enzyme {ECO:0000313|EMBL:AKB83041.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
RifSed_csp1_16ft_3_scaffold_19046_8
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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4884..5090
DNA (207bp) protein (69aa)
hypothetical protein
Putative uncharacterized protein bin=GWB2_Chloroflexi_49_20 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_13_Chloroflexi_66_10_curated
RifSed_csp1_16ft_3_scaffold_19046_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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5087..6664
DNA (1578bp) protein (526aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAU1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40350.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 9 items

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