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RifSed_csp1_16ft_3_scaffold_19695

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_19695_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..509)
DNA (507bp) protein (169aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=EF1A_METTP
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_19695_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(506..886)
DNA (381bp) protein (127aa)
Elongation factor 1-alpha Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L124_METHD
translation elongation factor EF-1 alpha
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_19695_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(959..3148)
DNA (2190bp) protein (730aa)
Elongation factor 2 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXB8_METHD
translation elongation factor aEF-2
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_19695_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3261..4517)
DNA (1257bp) protein (419aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=HEM1_METBU
RifSed_csp1_16ft_3_scaffold_19695_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4510..5043)
DNA (534bp) protein (178aa)
Siroheme synthase, N-terminal domain {ECO:0000313|EMBL:KCZ70748.1}; EC=1.3.1.76 {ECO:0000313|EMBL:KCZ70748.1};; EC=4.99.1.4 {ECO:0000313|EMBL:KCZ70748.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
siroheme synthase (EC:4.99.1.4)
Siroheme synthase Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E717_METMS
RifSed_csp1_16ft_3_scaffold_19695_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5040..5510)
DNA (471bp) protein (157aa)
Transcriptional regulator Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WM3_METBU
Transcriptional regulator {ECO:0000313|EMBL:KCZ70749.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AsnC family transcriptional regulator
RifSed_csp1_16ft_3_scaffold_19695_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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5546..5893
DNA (348bp) protein (116aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_19695_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5936..6502
DNA (567bp) protein (189aa)
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:KCZ73027.1}; EC=2.7.8.5 {ECO:0000313|EMBL:KCZ73027.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CDP-alcohol phosphatidyltransferase Tax=Methanobacterium sp. MB1 RepID=U6EC19_9EURY
CDP-alcohol phosphatidyltransferase
RifSed_csp1_16ft_3_scaffold_19695_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6550..7614
DNA (1065bp) protein (355aa)
myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_19695_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7616..8944)
DNA (1329bp) protein (443aa)
Peptidase U62 family protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XJ5_METBU
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:KCZ73025.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidase U62, modulator of DNA gyrase
RifSed_csp1_16ft_3_scaffold_19695_11
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8976..10319
DNA (1344bp) protein (448aa)
Radical SAM family protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TW6_METBU
Fe-S oxidoreductase {ECO:0000313|EMBL:KGK99323.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
radical SAM family Fe-S protein
RifSed_csp1_16ft_3_scaffold_19695_12
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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10415..10930
DNA (516bp) protein (172aa)
Uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=Thermococcus sp. CL1 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
RifSed_csp1_16ft_3_scaffold_19695_13
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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10927..11442
DNA (516bp) protein (172aa)
Uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=Thermococcus sp. CL1 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
RifSed_csp1_16ft_3_scaffold_19695_14
CG_Elusi_02, Elusimicrobia, Bacteria

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11725..12012
DNA (288bp) protein (96aa)
Tax=CG_Elusi_02
Displaying 14 items

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