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RifSed_csp1_16ft_3_scaffold_46845

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_46845_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(60..464)
DNA (405bp) protein (135aa)
Metal dependent phosphohydrolase Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9REA4_METVM
metal dependent phosphohydrolase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_16ft_3_scaffold_46845_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(461..973)
DNA (513bp) protein (171aa)
Transcription factor E Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM95_METZD
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Transcription initiation factor TFIIE {ECO:0000256|HAMAP-Rule:MF_01909}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
transcription factor TFIIE subunit alpha
RifSed_csp1_16ft_3_scaffold_46845_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1000..2100)
DNA (1101bp) protein (367aa)
Uncharacterized protein Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7Z3_METEZ
Putative ATP-dependent carboligase {ECO:0000313|EMBL:KCZ70652.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_3_scaffold_46845_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2097..2627)
DNA (531bp) protein (177aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_00077}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA (cytidine(56)-2'-O)-methyltransferase Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XK78_METZD
hypothetical protein
RifSed_csp1_16ft_3_scaffold_46845_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2631..3113)
DNA (483bp) protein (161aa)
mRNA 3-end processing factor Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TGX4_METAC
Putative exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:KCZ70654.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
mRNA 3-end processing factor
Displaying 5 items

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