ggKbase home page

RifSed_csp1_16ft_3_scaffold_45179

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_45179_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1..345)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2V8_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ71196.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
endonuclease III
RifSed_csp1_16ft_3_scaffold_45179_trna_1
unknown

Not on your lists

408..492
DNA (85bp)
transferRNA Leu
RifSed_csp1_16ft_3_scaffold_45179_2
unknown

Not on your lists

comp(495..695)
DNA (201bp) protein (67aa)

This feature has no annotations

RifSed_csp1_16ft_3_scaffold_45179_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(797..1303)
DNA (507bp) protein (169aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Probable deoxyuridine 5'-triphosphate nucleotidohydrolase Tax=Methanosarcina mazei RepID=DUT_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_45179_4
unknown

Not on your lists

1449..1622
DNA (174bp) protein (58aa)

This feature has no annotations

RifSed_csp1_16ft_3_scaffold_45179_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1855..2046)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71007.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_45179_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2138..3178)
DNA (1041bp) protein (347aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-)
Aspartate aminotransferase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DD7_METBF
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:KCZ72825.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying 7 items

View Taxonomy