ggKbase home page

RifSed_csp1_16ft_3_scaffold_56981

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_56981_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1..837)
DNA (837bp) protein (279aa)
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KCZ72252.1}; EC=1.6.99.3 {ECO:0000313|EMBL:KCZ72252.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
NAD-dependent epimerase/dehydratase bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NAD-dependent epimerase/dehydratase
RifSed_csp1_16ft_3_scaffold_56981_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1115..1519
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72747.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_56981_3
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

1588..2037
DNA (450bp) protein (150aa)
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
RifSed_csp1_16ft_3_scaffold_56981_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2228..2797)
DNA (570bp) protein (190aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Displaying 4 items

View Taxonomy