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RifSed_csp1_19ft_2_scaffold_1839

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_1839_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1..498
DNA (498bp) protein (166aa)
Chaperone protein DnaJ n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPX3_DESK7
molecular chaperone DnaJ
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_1839_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(512..1450)
DNA (939bp) protein (313aa)
UPI0003D1AFC8 related cluster n=1 Tax=unknown RepID=UPI0003D1AFC8 rbh
NAD-dependent epimerase/dehydratase rbh
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_1839_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1458..2462)
DNA (1005bp) protein (335aa)
dTDP-glucose pyrophosphorylase {ECO:0000313|EMBL:KCZ72085.1}; EC=2.7.7.24 {ECO:0000313|EMBL:KCZ72085.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1ADF3 related cluster n=1 Tax=unknown RepID=UPI0003D1ADF3 rbh
putative glucose-1-phosphate thymidylyltransferase rbh
RifSed_csp1_19ft_2_scaffold_1839_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2469..3923)
DNA (1455bp) protein (485aa)
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:KCZ72086.1}; EC=2.7.7.22 {ECO:0000313|EMBL:KCZ72086.1};; EC=5.3.1.8 {ECO:0000313|EMBL:KCZ72086.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJK3_METAC rbh
rfbM; mannose-1-phosphate guanylyltransferase rbh
RifSed_csp1_19ft_2_scaffold_1839_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3865..5148)
DNA (1284bp) protein (428aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:KCZ72087.1}; EC=1.1.1.22 {ECO:0000313|EMBL:KCZ72087.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UDP-glucose 6-dehydrogenase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFC1_9EURY rbh
UDP-glucose 6-dehydrogenase rbh
RifSed_csp1_19ft_2_scaffold_1839_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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5604..6113
DNA (510bp) protein (170aa)
Intracellular protease, PfpI family n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6X2_METEZ
PfpI family intracellular protease
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_1839_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

6271..6612
DNA (342bp) protein (114aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_1839_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6566..7504
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469K6_METBF
Flp pilus assembly protein TadD {ECO:0000313|EMBL:KCZ71404.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_1839_9
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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7824..8063
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZV0_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ34362.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_1839_10
unknown

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comp(8068..8274)
DNA (207bp) protein (69aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_1839_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


8422..10164
DNA (1743bp) protein (581aa)
Glycyl-tRNA synthetase {ECO:0000313|EMBL:KCZ73120.1}; EC=6.1.1.14 {ECO:0000313|EMBL:KCZ73120.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glycyl-tRNA synthetase, dimeric type n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTS6_METHD rbh
glycyl-tRNA synthetase, dimeric type rbh
RifSed_csp1_19ft_2_scaffold_1839_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10173..10802
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5U3_METTP
Dolichol kinase {ECO:0000313|EMBL:KCZ73121.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_1839_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10945..11271
DNA (327bp) protein (109aa)
ATP synthase, H subunit {ECO:0000313|EMBL:KCZ71347.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KCZ71347.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATP synthase H subunit n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP32_METZD
ATP synthase H subunit
RifSed_csp1_19ft_2_scaffold_1839_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11264..13234
DNA (1971bp) protein (657aa)
V-type ATP synthase subunit I (EC:3.6.3.14)
V-type ATP synthase subunit I n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I4H6_METCZ rbh
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_1839_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13240..13467
DNA (228bp) protein (76aa)
ATP synthase subunit C {ECO:0000313|EMBL:KCZ71345.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KCZ71345.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
H+transporting two-sector ATPase C subunit n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1G8_FERPA
H+transporting two-sector ATPase C subunit
RifSed_csp1_19ft_2_scaffold_1839_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13476..14027
DNA (552bp) protein (184aa)
V-type ATP synthase subunit E (EC:3.6.3.14)
V-type ATP synthase subunit E n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=VATE_METBU
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_1839_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14035..15054
DNA (1020bp) protein (340aa)
V-type ATP synthase subunit C n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E706_METMS rbh
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATP synthase A1, C subunit rbh
RifSed_csp1_19ft_2_scaffold_1839_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15055..15354
DNA (300bp) protein (100aa)
V-type ATP synthase subunit F n=2 Tax=root RepID=D7E6E5_METEZ
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
vacuolar H+transporting two-sector ATPase subunit F
RifSed_csp1_19ft_2_scaffold_1839_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15406..17142
DNA (1737bp) protein (579aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
V-type ATP synthase subunit A (EC:3.6.3.14) rbh
V-type ATP synthase alpha chain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=VATA_METBU rbh
RifSed_csp1_19ft_2_scaffold_1839_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17144..18535
DNA (1392bp) protein (464aa)
V-type ATP synthase beta chain n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYC8_METHD rbh
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATP synthase, B subunit rbh
RifSed_csp1_19ft_2_scaffold_1839_21
unknown

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18537..18623
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 21 items

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