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RifSed_csp1_19ft_2_scaffold_3390

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_3390_1
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..860
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXH9_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49801.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp1_19ft_2_scaffold_3390_2
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1060..2607
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXH9_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49801.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp1_19ft_2_scaffold_3390_3
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3209..3781
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXJ6_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49821.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp1_19ft_2_scaffold_3390_4
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3783..4583
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYS6_METHD
Uncharacterized protein {ECO:0000313|EMBL:AKB18660.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_3390_5
unknown

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4626..4727
DNA (102bp) protein (34aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_3390_6
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4760..6673
DNA (1914bp) protein (638aa)
Phage tail sheath protein, putative n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74EI7_GEOSL rbh
Tail protein {ECO:0000313|EMBL:KIE42946.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
phage tail sheath protein rbh
RifSed_csp1_19ft_2_scaffold_3390_7
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6736..7179
DNA (444bp) protein (148aa)
Conserved hypothetical phage tail region protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0D4_METHD
conserved hypothetical phage tail region protein
Conserved hypothetical phage tail region protein {ECO:0000313|EMBL:AGB49818.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp1_19ft_2_scaffold_3390_8
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7190..7555
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWL4_METHD
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
RifSed_csp1_19ft_2_scaffold_3390_9
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7758..8192
DNA (435bp) protein (145aa)
Conserved hypothetical phage tail region protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYS1_METHD
conserved hypothetical phage tail region protein
Conserved hypothetical phage tail region protein {ECO:0000313|EMBL:AGB49815.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp1_19ft_2_scaffold_3390_10
unknown

Not on your lists

8196..9311
DNA (1116bp) protein (372aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_3390_11
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9312..9980
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAM4_9ARCH rbh
LysM domain/BON superfamily protein {ECO:0000313|EMBL:AKB18667.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
LysM domain-containing protein
RifSed_csp1_19ft_2_scaffold_3390_12
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9987..11075
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I820_9BACL
VgrG protein {ECO:0000313|EMBL:AKB18668.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_3390_13

Not on your lists

11072..11722
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAM5_9ARCH rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39155.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_3390_14
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

11734..12027
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAM7_9ARCH
hypothetical protein
Tax=RBG_16_Chloroflexi_48_7_curated
RifSed_csp1_19ft_2_scaffold_3390_15

Not on your lists

12042..12446
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAM8_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39158.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
phage baseplate assembly protein W
RifSed_csp1_19ft_2_scaffold_3390_16

Not on your lists

12452..15688
DNA (3237bp) protein (1079aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAM9_9ARCH rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39159.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
baseplate J-like protein
RifSed_csp1_19ft_2_scaffold_3390_17
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15814..16821
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0C7_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49808.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp1_19ft_2_scaffold_3390_18
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16808..19396
DNA (2589bp) protein (863aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248C722 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ26400.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_3390_19

Not on your lists

19393..21504
DNA (2112bp) protein (704aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAN1_9ARCH rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39161.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
phage tail protein
RifSed_csp1_19ft_2_scaffold_3390_20

Not on your lists

21567..23096
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAN2_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39162.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_3390_21
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23125..24456
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAN2_9ARCH
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
RifSed_csp1_19ft_2_scaffold_3390_22
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24487..25248
DNA (762bp) protein (254aa)
glycosyl transferase n=1 Tax=Acidovorax radicis RepID=UPI00023751D3
wcaA1; glycosyltransferase
Tax=GWA2_Burkholderiales_64_37_curated
RifSed_csp1_19ft_2_scaffold_3390_23
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25338..25787
DNA (450bp) protein (150aa)
Hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1JAN7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KHE93422.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein
Displaying 23 items

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