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RifSed_csp1_19ft_2_scaffold_20294

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_20294_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..682)
DNA (681bp) protein (227aa)
ABC transporter related protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNW5_METZD
ABC transporter
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_20294_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(670..1476)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 2100 RepID=N9QAW5_9GAMM
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_20294_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1476..2576)
DNA (1101bp) protein (367aa)
Nitrate ABC transporter, ATP-binding protein, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29615_ARCFU
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_20294_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2699..3217
DNA (519bp) protein (173aa)
Transcriptional regulator, XRE family n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGL6_9EURY
transcriptional regulator, XRE family
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_20294_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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3781..4635
DNA (855bp) protein (285aa)
Permease n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YU94_THEON
permease
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_20294_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4662..5666)
DNA (1005bp) protein (335aa)
Pyruvate-formate lyase-activating enzyme {ECO:0000313|EMBL:KCZ73678.1}; EC=1.97.1.4 {ECO:0000313|EMBL:KCZ73678.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Pyruvate-formate lyase-activating enzyme n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVF5_METHD rbh
pyruvate-formate lyase-activating enzyme rbh
RifSed_csp1_19ft_2_scaffold_20294_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5663..7924)
DNA (2262bp) protein (754aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPU1_METAC rbh
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:KCZ73677.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein rbh
RifSed_csp1_19ft_2_scaffold_20294_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8040..9197)
DNA (1158bp) protein (386aa)
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:KCZ72444.1}; EC=2.3.3.- {ECO:0000313|EMBL:KCZ72444.1};; EC=2.3.3.14 {ECO:0000313|EMBL:KCZ72444.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
2-isopropylmalate synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGD8_9EURY rbh
2-isopropylmalate synthase rbh
RifSed_csp1_19ft_2_scaffold_20294_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9241..10227
DNA (987bp) protein (329aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable methanogen homoaconitase large subunit n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=HACA_METAC rbh
Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 (large subunit)
RifSed_csp1_19ft_2_scaffold_20294_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10231..12510)
DNA (2280bp) protein (760aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2) rbh
Phosphoenolpyruvate synthase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I8I8_METCZ rbh
RifSed_csp1_19ft_2_scaffold_20294_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12500..12940)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4A0_UNCMA
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71227.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_20294_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(13087..13482)
DNA (396bp) protein (132aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 12 items

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