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RifSed_csp1_19ft_2_scaffold_7622

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_7622_1
unknown

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202..414
DNA (213bp) protein (71aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_7622_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(437..1522)
DNA (1086bp) protein (362aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QI03_METMZ rbh
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:KCZ72825.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase rbh
RifSed_csp1_19ft_2_scaffold_7622_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1527..2183)
DNA (657bp) protein (219aa)
Acetyltransferase n=2 Tax=Methanosarcina mazei RepID=M1Q8S1_METMZ
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase {ECO:0000313|EMBL:KCZ72826.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acetyltransferase
RifSed_csp1_19ft_2_scaffold_7622_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2192..3154)
DNA (963bp) protein (321aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:KCZ72827.1}; EC=2.7.8.15 {ECO:0000313|EMBL:KCZ72827.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1A976 related cluster n=1 Tax=unknown RepID=UPI0003D1A976 rbh
UDP-N-acetylglucosamine-1-phosphate transferase rbh
RifSed_csp1_19ft_2_scaffold_7622_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3813..7262
DNA (3450bp) protein (1150aa)
Protein containing DUF1616 and fibronectin type III-like domains n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XZ6_METBU rbh
Putative membrane protein {ECO:0000313|EMBL:KCZ71155.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein rbh
RifSed_csp1_19ft_2_scaffold_7622_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7296..8054
DNA (759bp) protein (253aa)
Protease HtpX homolog n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E7N6_FLESM
protease htpX
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_7622_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8051..8500
DNA (450bp) protein (150aa)
UPI0003D1C28A related cluster n=1 Tax=unknown RepID=UPI0003D1C28A
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_19ft_2_scaffold_7622_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8588..8986
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFC0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72279.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_7622_9
unknown

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comp(9310..9537)
DNA (228bp) protein (76aa)

This feature has no annotations

RifSed_csp1_19ft_2_scaffold_7622_10
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(9503..10207)
DNA (705bp) protein (235aa)
Winged helix-turn helix n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T7W2_9EURY
Winged helix-turn helix {ECO:0000313|EMBL:EMR74909.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
hypothetical protein
Displaying 10 items

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