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RifSed_csp1_19ft_2_scaffold_25636

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_25636_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..330)
DNA (330bp) protein (110aa)
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:KCZ73329.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KCZ73329.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Molybdopterin oxidoreductase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSA4_9BACT
molybdopterin oxidoreductase, molybdopterin-binding subunit
RifSed_csp1_19ft_2_scaffold_25636_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(501..1133)
DNA (633bp) protein (211aa)
Response regulator {ECO:0000313|EMBL:KCZ73330.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Response regulator receiver protein id=2227605 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
response regulator receiver protein
RifSed_csp1_19ft_2_scaffold_25636_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1111..2889)
DNA (1779bp) protein (593aa)
PAS domain S-box {ECO:0000313|EMBL:KCZ73331.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KCZ73331.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PAS:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A-like id=2096769 bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
two-component hybrid sensor and regulator
RifSed_csp1_19ft_2_scaffold_25636_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2867..3793)
DNA (927bp) protein (309aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PQG9_DESSD
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:KCZ73332.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein
RifSed_csp1_19ft_2_scaffold_25636_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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3837..5012
DNA (1176bp) protein (392aa)
molybdenum cofactor synthesis domain protein (EC:2.10.1.1)
Molybdenum cofactor biosynthesis protein (MoeA-3) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30076_ARCFU
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 5 items

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