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RifSed_csp1_19ft_2_scaffold_39595

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_39595_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..957
DNA (957bp) protein (319aa)
Pyrimidine deaminase archaeal predicted (EC:3.5.4.26)
Chlorohydrolase family protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46F74_METBF
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:KCZ72243.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_19ft_2_scaffold_39595_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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978..1424
DNA (447bp) protein (149aa)
Universal stress protein F-like protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TM2_METBU
Universal stress protein UspA-like protein {ECO:0000313|EMBL:KCZ72244.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_39595_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1531..2190
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q1U5_METMZ
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72245.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_39595_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2243..2770)
DNA (528bp) protein (176aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X41_METBU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_39595_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2736..3257)
DNA (522bp) protein (174aa)
UPF0290 protein Mtc_0822 n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAA9_METCZ
UPF0290 protein ANME2D_01651 {ECO:0000256|HAMAP-Rule:MF_01117}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_19ft_2_scaffold_39595_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3266..3718)
DNA (453bp) protein (151aa)
Deoxycytidylate deaminase {ECO:0000313|EMBL:KCZ72247.1}; EC=3.5.4.12 {ECO:0000313|EMBL:KCZ72247.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1B80C related cluster n=1 Tax=unknown RepID=UPI0003D1B80C
deoxycytidylate deaminase
RifSed_csp1_19ft_2_scaffold_39595_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3827..4768
DNA (942bp) protein (314aa)
Protein-export membrane protein SecF n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1H3_METHD rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
preprotein translocase subunit SecF rbh
RifSed_csp1_19ft_2_scaffold_39595_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4765..6432
DNA (1668bp) protein (556aa)
Protein-export membrane protein SecD n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46E66_METBF rbh
Protein-export membrane protein SecD
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_19ft_2_scaffold_39595_trna_1
unknown

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6482..6555
DNA (74bp)
transferRNA Thr
Displaying 9 items

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