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RifSed_csp1_19ft_2_scaffold_110316_5

Organism: RifSed_csp1_19ft_2_Methanoperedens_42_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 17 / 38 MC: 1
Location: comp(1955..2335)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S11 n=2 Tax=Methanosarcina mazei RepID=RS11_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 126.0
  • Bit_score: 216
  • Evalue 1.40e-53
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 126.0
  • Bit_score: 243
  • Evalue 1.50e-61
rps11p; 30S ribosomal protein S11 similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 126.0
  • Bit_score: 216
  • Evalue 4.00e-54

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 381
ATGGCAACAGAAAAATGGGGTGTAGCCCATATATATTCATCATTTAACAACACGCTGATAACCATAACAGATCTGACAGGAGCAGAGACCATAGCAAAAACAAGCGGCGGCATGGTAACAAAAGCTGCCAGGGAAGAGAGTTCTCCATACACTGCCATGCAGATGGCGAACCAGATCGCTGATAAGATCCGGGATAAAGGAGTTACAGGCATACATATAAAAGTAAGAGCGCCAGGGGGCAACATGCAGCGAAGCCCAGGACCTGGAGCTCAGGCAGCTATTCGCGCATTTGCCAGAGCAGGGATCAAGATCGGACGGATCGAAGATGTGACGCCGATTCCCCATGATGGCACGAAGGCCAAGAAGGGAAGGCGAGTATAA
PROTEIN sequence
Length: 127
MATEKWGVAHIYSSFNNTLITITDLTGAETIAKTSGGMVTKAAREESSPYTAMQMANQIADKIRDKGVTGIHIKVRAPGGNMQRSPGPGAQAAIRAFARAGIKIGRIEDVTPIPHDGTKAKKGRRV*