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RifSed_csp1_19ft_2_scaffold_110316

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_2_scaffold_110316_1
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..294)
DNA (294bp) protein (98aa)
UDP-glucose 6-dehydrogenase Udg {ECO:0000313|EMBL:ESS71605.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ESS71605.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
ugd; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase Udg n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BE90_9GAMM
RifSed_csp1_19ft_2_scaffold_110316_2
R_Gammaproteobacteria_43_28, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(291..719)
DNA (429bp) protein (143aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMA8_9BACT
NAD-dependent epimerase/dehydratase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_43_28_curated
RifSed_csp1_19ft_2_scaffold_110316_3
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

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comp(685..1023)
DNA (339bp) protein (113aa)
nucleoside-diphosphate sugar epimerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5039
NAD-dependent epimerase/dehydratase
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
RifSed_csp1_19ft_2_scaffold_110316_trna_1
unknown

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comp(1067..1151)
DNA (85bp)
transferRNA Leu
RifSed_csp1_19ft_2_scaffold_110316_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1167..1952)
DNA (786bp) protein (262aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
UPI0003D1C798 related cluster n=1 Tax=unknown RepID=UPI0003D1C798 rbh
RifSed_csp1_19ft_2_scaffold_110316_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1955..2335)
DNA (381bp) protein (127aa)
30S ribosomal protein S11 n=2 Tax=Methanosarcina mazei RepID=RS11_METMA
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps11p; 30S ribosomal protein S11
RifSed_csp1_19ft_2_scaffold_110316_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2338..2844)
DNA (507bp) protein (169aa)
30S ribosomal protein S4 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMN7_METZD
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S4
Displaying 7 items

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