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RifSed_csp1_19ft_3_scaffold_5901

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_3_scaffold_5901_1
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

978..1262
DNA (285bp) protein (95aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
RifSed_csp1_19ft_3_scaffold_5901_2
unknown

Not on your lists

comp(1371..1559)
DNA (189bp) protein (63aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_5901_trna_2
unknown

Not on your lists

comp(1675..1749)
DNA (75bp)
transferRNA Glu
RifSed_csp1_19ft_3_scaffold_5901_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1790..2407)
DNA (618bp) protein (206aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000369A72A
Na+/solute symporter
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2470..3228)
DNA (759bp) protein (253aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003780283
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3406..4197)
DNA (792bp) protein (264aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003618409
translation initiation factor 2, alpha subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4194..4373)
DNA (180bp) protein (60aa)
30S ribosomal protein S27e Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=RS27_PYRAB
rps27e; 30S ribosomal protein S27e
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4370..4660)
DNA (291bp) protein (97aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F015E
rpl44e; 50S ribosomal protein L44e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_5901_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5238..5603
DNA (366bp) protein (122aa)
Transcriptional regulator, TrmB Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5S4_9EURY
transcriptional regulator, TrmB
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5596..6282)
DNA (687bp) protein (229aa)
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A Tax=Gloeobacter kilaueensis JS1 RepID=U5QS13_9CYAN
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_10
unknown

Not on your lists

comp(6282..6407)
DNA (126bp) protein (42aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_5901_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6498..7169
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Euryarchaeota RepID=M9SHH4_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_trna_1
unknown

Not on your lists

comp(7176..7250)
DNA (75bp)
transferRNA Pro
RifSed_csp1_19ft_3_scaffold_5901_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7435..8400)
DNA (966bp) protein (322aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D7D20
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(8397..8954)
DNA (558bp) protein (186aa)
Non-canonical purine NTP pyrophosphatase Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A358_THEGJ
putative deoxyribonucleotide triphosphate pyrophosphatase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(8951..9382)
DNA (432bp) protein (144aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E55C1
serine/threonine protein kinase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9447..11462)
DNA (2016bp) protein (672aa)
Putative helicase Tax=uncultured archaeon RepID=D1JIC7_9ARCH
ATP dependent helicase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_5901_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11590..12450
DNA (861bp) protein (287aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 18 items

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