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RifSed_csp1_19ft_3_scaffold_79

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Displaying items 1-30 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_3_scaffold_79_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2..1765)
DNA (1764bp) protein (588aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T07_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87213.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
RifSed_csp1_19ft_3_scaffold_79_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1848..2381
DNA (534bp) protein (178aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035FE97A
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_79_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2374..2550)
DNA (177bp) protein (59aa)
UPF0434 protein UNCMA_12790 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3T4_UNCMA
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_79_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

2736..9257
DNA (6522bp) protein (2174aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003754B7A
putative membrane protein, required for N-linked glycosylation
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_19ft_3_scaffold_79_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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9259..10032
DNA (774bp) protein (258aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_79_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10068..10685)
DNA (618bp) protein (206aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000372E0F1
putative RNA-binding protein of the translin family
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10750..12069)
DNA (1320bp) protein (440aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBZ3_9EURY
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12105..12995)
DNA (891bp) protein (297aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBV0_9EURY
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13108..13611
DNA (504bp) protein (168aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13854..14987
DNA (1134bp) protein (378aa)
Digeranylgeranylglycerophospholipid reductase Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PVS3_METTM
dehydrogenase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_11
unknown

Not on your lists

comp(14965..15834)
DNA (870bp) protein (290aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_79_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15839..16801
DNA (963bp) protein (321aa)
Methylenetetrahydrofolate reductase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB79_AMMDK
methylenetetrahydrofolate reductase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

16857..18389
DNA (1533bp) protein (511aa)
Bifunctional purine biosynthesis protein PurH Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZ47_PELTS
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18398..19039
DNA (642bp) protein (214aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSW3_9FIRM
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

19499..19996
DNA (498bp) protein (166aa)
Putative GAF sensor protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C712_SPHTD
putative GAF sensor protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_19ft_3_scaffold_79_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20114..20659)
DNA (546bp) protein (182aa)
Transcriptional regulator, ArsR family Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN89_ARCVS
ArsR family transcriptional regulator
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20678..20941)
DNA (264bp) protein (88aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20992..22065)
DNA (1074bp) protein (358aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_19

Not on your lists

22205..23053
DNA (849bp) protein (283aa)
Putative PKD domain protein Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS8_9ZZZZ
PDK repeat-containing protein
Putative PKD domain protein {ECO:0000313|EMBL:ABZ10037.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10F13.;"
RifSed_csp1_19ft_3_scaffold_79_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(23142..23363)
DNA (222bp) protein (74aa)
Deoxyribonuclease/rho motif-related TRAM Tax=Methanobacterium formicicum DSM 3637 RepID=K2QBP8_METFO
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(23521..23928)
DNA (408bp) protein (136aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_79_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(24035..24391)
DNA (357bp) protein (119aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

24597..25028
DNA (432bp) protein (144aa)
Ferredoxin Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97CI1_THEVO
ferredoxin
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_19ft_3_scaffold_79_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

25123..25899
DNA (777bp) protein (259aa)
Probable DNA repair protein Toce_0248 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0A6_THEOJ
DNA end-binding protein Ku
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

25906..26877
DNA (972bp) protein (324aa)
DNA ligase, putative Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
DNA ligase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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26928..29057
DNA (2130bp) protein (710aa)
Methionine--tRNA ligase Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HP28_ACIS0
methionyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_27
unknown

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29115..29342
DNA (228bp) protein (76aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_79_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

29565..30233
DNA (669bp) protein (223aa)
Putative metal-dependent phosphoesterase, PHP family Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNB7_ACIS0
putative metal-dependent phosphoesterase, PHP family
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_79_29
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(30230..30589)
DNA (360bp) protein (120aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000360600D
Roadblock/LC7 family protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_79_30
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(30686..31105)
DNA (420bp) protein (140aa)
6,7-dimethyl-8-ribityllumazine synthase Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RISB_METKA
ribH; 6,7-dimethyl-8-ribityllumazine synthase
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 79 in total

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