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RifSed_csp1_19ft_3_scaffold_543

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_3_scaffold_543_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

209..2200
DNA (1992bp) protein (664aa)
DNA topoisomerase VI subunit B (EC:5.99.1.3)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003735A5E
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_543_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2193..3290
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B18DA
DNA topoisomerase VI, subunit A
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_543_trna_1
unknown

Not on your lists

comp(3313..3386)
DNA (74bp)
transferRNA Arg
RifSed_csp1_19ft_3_scaffold_543_3
unknown

Not on your lists

comp(3440..3739)
DNA (300bp) protein (100aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_543_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3801..4430)
DNA (630bp) protein (210aa)
adenylate kinase (EC:2.7.4.3)
adenylate kinase Tax=Hippea alviniae RepID=UPI0003B78B8A
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4471..5430)
DNA (960bp) protein (320aa)
mvd; diphosphomevalonate decarboxylase (EC:4.1.1.33)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003814E9E
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5427..6164)
DNA (738bp) protein (246aa)
Putative hydrolase (HAD superfamily) bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HAD family hydrolase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6173..6577)
DNA (405bp) protein (135aa)
Protein archease Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W861_UNCMA
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6617..7372)
DNA (756bp) protein (252aa)
7-carboxy-7-deazaguanine synthase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P4Z3_AROAE
radical activating enzyme
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7435..8136)
DNA (702bp) protein (234aa)
hypothetical protein Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI00037F892C
queuosine biosynthesis protein QueC
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8179..9246)
DNA (1068bp) protein (356aa)
Peptidase M42 family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XE97_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
RifSed_csp1_19ft_3_scaffold_543_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(9678..10652)
DNA (975bp) protein (325aa)
Diphthamide synthase subunit Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVT3_METMA
dph2; diphthamide synthase subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_12
unknown

Not on your lists

comp(10695..11339)
DNA (645bp) protein (215aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_543_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11486..11944
DNA (459bp) protein (153aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_543_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(12023..12511)
DNA (489bp) protein (163aa)
50S ribosomal protein L10e Tax=Methanoplanus limicola DSM 2279 RepID=H1Z4H9_9EURY
rpl10e; 50S ribosomal protein L10e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12649..13425
DNA (777bp) protein (259aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000365E8E8
putative archaeal kinase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_543_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13427..14494
DNA (1068bp) protein (356aa)
Isopentenyl-diphosphate delta-isomerase, FMN-dependent Tax=mine drainage metagenome RepID=T1BSF2_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_543_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

14446..15624
DNA (1179bp) protein (393aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI0003620D93
polyprenyl synthetase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15621..16289)
DNA (669bp) protein (223aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037AEB38
radB; DNA repair and recombination protein RadB
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_543_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(16340..17356)
DNA (1017bp) protein (339aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000372BEED
NMD3 family protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_19ft_3_scaffold_543_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

17466..17990
DNA (525bp) protein (175aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(18002..18298)
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q979V0_THEVO
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_543_22
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(18323..22453)
DNA (4131bp) protein (1377aa)
MCM2/3/5 family DNA replication licensing factor Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HIY0_THES4
MCM2/3/5 family DNA replication licensing factor
MCM2/3/5 family DNA replication licensing factor {ECO:0000313|EMBL:AEK72909.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. (strain CGMCC 1.5172 / 4557).;"
RifSed_csp1_19ft_3_scaffold_543_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

22845..23204
DNA (360bp) protein (120aa)
hypothetical protein Tax=Desulfovibrio longus RepID=UPI0003B53062
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_3_scaffold_543_24
unknown

Not on your lists

comp(23227..24333)
DNA (1107bp) protein (369aa)

This feature has no annotations

RifSed_csp1_19ft_3_scaffold_543_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

24443..24847
DNA (405bp) protein (135aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A1694
formylmethanofuran dehydrogenase subunit E-like
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_19ft_3_scaffold_543_26
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(24852..30119)
DNA (5268bp) protein (1756aa)
id=7201299 bin=TA06_GWE2_final species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=TA06_GWE2_final organism_group=TA06
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_3_scaffold_543_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(30236..30946)
DNA (711bp) protein (237aa)
Circadian clock protein, KaiC Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_543_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

31223..31807
DNA (585bp) protein (195aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C24E3
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_3_scaffold_543_29
unknown

Not on your lists

comp(32156..32428)
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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