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RifSed_csp1_19ft_4_scaffold_1552

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_19ft_4_scaffold_1552_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2..1738)
DNA (1737bp) protein (579aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JJ21_9ARCH
FHA domain-containing protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1779..2285)
DNA (507bp) protein (169aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YJL9_9EURY
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2296..2853)
DNA (558bp) protein (186aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003602188
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2995..3717
DNA (723bp) protein (241aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3721..4599)
DNA (879bp) protein (293aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

4632..5348
DNA (717bp) protein (239aa)
Circadian clock protein, KaiC Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_19ft_4_scaffold_1552_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5410..5826
DNA (417bp) protein (139aa)
Putative uncharacterized protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E841_METMS
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5831..6271)
DNA (441bp) protein (147aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003783FE3
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6482..7273
DNA (792bp) protein (264aa)
Circadian clock protein, KaiC Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7270..7680)
DNA (411bp) protein (137aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035FAAE2
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

7846..8790
DNA (945bp) protein (315aa)
Thioredoxin reductase (EC:1.8.1.9)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035ECD8A
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8778..9440)
DNA (663bp) protein (221aa)
Putative Phosphoglycolate phosphatase bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
phosphoglycolate phosphatase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_4_scaffold_1552_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(9451..9948)
DNA (498bp) protein (166aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000360A824
putative RNA-binding protein (contains PUA domain)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10010..12223)
DNA (2214bp) protein (738aa)
Tetratricopeptide TPR_2 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10XK5_TRIEI
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12438..13472
DNA (1035bp) protein (345aa)
Glycerol-1-phosphate dehydrogenase [NAD(P)] (EC:1.1.1.261)
NAD(P)-dependent glycerol-1-phosphate dehydrogenase Tax=uncultured organism RepID=M1PPK9_9ZZZZ
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13492..14244)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037337F6
serine/threonine protein kinase involved in cell cycle control
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14498..14896
DNA (399bp) protein (133aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14930..16198)
DNA (1269bp) protein (423aa)
Molybdenum cofactor biosynthesis protein MoeA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFZ0_9BACT
molybdenum cofactor biosynthesis protein MoeA
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16195..16695)
DNA (501bp) protein (167aa)
Molybdenum cofactor synthesis domain Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B291_HERA2
molybdenum cofactor synthesis domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_4_scaffold_1552_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16970..18208)
DNA (1239bp) protein (413aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_4_scaffold_1552_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18523..18855)
DNA (333bp) protein (111aa)
hypothetical protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
conserved membrane protein of unknown function
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_4_scaffold_1552_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

19287..19496
DNA (210bp) protein (70aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_19ft_4_scaffold_1552_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(19451..19969)
DNA (519bp) protein (173aa)
Molybdenum cofactor synthesis domain protein Tax=Geobacillus sp. (strain C56-T3) RepID=D7D1Y7_GEOSC
molybdenum cofactor synthesis protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_19ft_4_scaffold_1552_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20022..20261)
DNA (240bp) protein (80aa)
Probable cyclic pyranopterin monophosphate synthase accessory protein Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFR8_PYRYC
putative molybdenum cofactor biosynthesis protein MoaC
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 24 items

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